KEGG   Streptomyces clavuligerus: BB341_13435
Entry
BB341_13435       CDS       T04717                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
sclf  Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:sclf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sclf03021]
    BB341_13435
Transcription machinery [BR:sclf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BB341_13435
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Crp_2 Sigma70_ECF HTH_3 HTH_24 MarR DUF7343 DUF134
Other DBs
NCBI-ProteinID: ANW19148
LinkDB
Position
3321014..3321892
AA seq 292 aa
MSEEQGSSKVLTLPPVPSAPAPATADSSGTIDTRTLSRSLFLRLRALDAEAAEGPDGPVV
SPERTYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFP
TFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQRLDRSPTVPELAAVLG
VSEEEVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLA
KLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRDGLIAD
NT seq 879 nt   +upstreamnt  +downstreamnt
atgtccgaagaacagggcagctcgaaggtgctcacgcttccgcccgtaccgagcgcaccc
gcgccggccacagccgacagctcggggaccatcgacacccgtaccctgtcccgctccctg
ttcctgcggctgcgcgccctggacgcggaggccgcggagggacccgacggaccggtcgtc
agccccgagcgcacctatgtgcgcgacaccctgatcgagctgaacctgcccctggtccgg
tacgccgcggcccgcttccgcagccgcaacgagccgatggaggacatcgtccaggtcggg
acgatcggtctgatcaaggcgatcgaccggttcgactgcgaacggggcgtggagttcccg
acgttcgccatgccgacggtcgtgggcgagatcaagcgcttcttccgggacacctcctgg
tcagtgcgggtgccgcggcggctccaggagctgcggctcgcgctcaccaaggccagtgac
gagctggcgcagcgcctggaccgctcgccgaccgtgcccgaactcgccgcggtactgggg
gtgtcggaggaggaggtcgtcgacgggctggccgtcggcaacgcgtacaccgcgtcctcg
ctggactcgccgtccccggaggacgacggcggcgagggctcgctcgcggaccggctgggg
tacgaggacacggcgctggagggcgtggagtaccgcgagtccctgaagccgctgctggcc
aaactgccgccccgggaacggcagatcatcatgctgcggttcttcgcgaacatgacgcag
tcgcagatcggcgaggaggtcggcatctcgcagatgcatgtctcgcggctgctgacgcgg
acgctcgcgcagctccgggacggtctgatcgcggactga

DBGET integrated database retrieval system