Streptomyces clavuligerus: BB341_15875
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Entry
BB341_15875 CDS
T04717
Name
(GenBank) restriction endonuclease
KO
K19789
DNA repair protein RadD
Organism
sclf
Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_15875
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BB341_15875
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
AAA_34
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANW19591
UniProt:
E2Q9L6
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All DBs
Position
complement(3933113..3934729)
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AA seq
538 aa
AA seq
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MIGSPGIAFQAVLDAAPLSYIRRLLGEHACELLTLLREGSVEDAIRKVAASAVSPEQLIG
DPEERAQLLELLPEGKKVELAERLGWDNSSSPTVFLSALPWTLEERRVFLGFLGLVVDRA
PEAPVSSRRPSEPSYGLFPHQRRAAGKVRRLLYSGERRTVLHLPTGVGKTRTGMDLICDH
LRQHEPTLVVWLARGRELLEQAALEFERAWASLGNREVTVARMWGDAPTDLDDITDGIVV
LGLEKAGAAAKSTPGFLDQLALRTTLTVFDEAHQAIAPTYRRVVEALTLRSDSSLLGLTA
TPGRTWADISEDEKLADFFARQKVMLEIDGYDNPVTALIEQGYLARPDFRTVAADSGMKL
SARDKQALAASFDIPDELITRLADNVQWNLQVVRTVLDLSGQHRRILLFAASIEHSRLIV
AILSMFGIDAEQVTGESSTRHRDRVINRFKGPGTRPMVLSNYGVLTTGFDAPAASAAVIA
RPTRSLVLYSQMVGRVIRGPKAGGTSTCDVVTVVDPALPGFGDVAEAFTNWEDVWKAL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgggtctccgggcatcgcgtttcaggccgtccttgatgcggcccccctgagctac
atacggcgcctgcttggcgagcacgcctgcgaactcctcacattgctgcgggaggggtcc
gttgaggatgccatccggaaggtcgcggcctcggcagtctctccggagcagttgatcggc
gatcccgaggagcgcgcgcagctgctggagctgcttcccgagggcaagaaggtggaacta
gcagaacgcctcggttgggacaattcttcgtcgccgacggtattcctgtctgctctgccc
tggacgcttgaagagcgccgcgtattccttggcttccttgggctcgtcgttgatcgagcg
cccgaggctcccgtgtcctcacggagaccgtccgaaccgagctatggcctgttcccgcat
cagcggcgtgcggccggcaaggtgcggcgtctgctctactccggtgagcgccgcacggtg
ttgcacctgccgaccggggtcggtaagacgcgcaccggcatggacctgatctgtgaccac
ctgcggcagcatgagcccactctggtcgtgtggctggcccggggccgcgagctcctcgaa
caggccgcgctcgagttcgagcgcgcatgggcctctctcggcaatcgggaggtcaccgta
gcccggatgtggggggacgctcccaccgatcttgacgacatcaccgacggcattgtcgta
ctcgggctggagaaggcaggtgccgcggcgaagagtacgccgggctttctcgaccaactt
gcgctccgcaccacgctcacagtcttcgacgaggctcatcaagccatcgcgcccacttac
cgccgggtggtcgaagccctcacgctccgtagcgattcgagcctcttggggctgactgcc
acgccgggaaggacgtgggccgacatctcggaggacgagaagctcgcggacttcttcgca
cgccagaaggtgatgctggaaatcgatgggtacgacaaccccgtcaccgctctcatcgag
caggggtacctcgcccgcccagactttcgcacggtcgcggctgactctgggatgaagctc
agcgcccgggacaagcaggctctcgctgcgtcctttgacatccccgatgaactgatcaca
cgtcttgccgacaacgtgcagtggaaccttcaggtcgtccgcaccgtgctcgatctcagc
ggacagcacaggcgcatcctgctattcgccgcctcgatcgagcacagccgcctgatcgtc
gccatcctgagcatgttcggaatcgatgccgagcaggtcacgggcgaatcctcaacgcgt
catcgcgatcgagtgatcaaccgcttcaagggccctggaacccgaccgatggtcctctcg
aactacggcgtgctcaccactggcttcgatgcccccgcggcgagcgccgccgtgattgcc
cgccctactcgctcactcgtgctgtacagccagatggtgggccgcgtgatccgcgggccc
aaggccggcggtacctccacatgcgacgtcgtgaccgtcgtcgaccccgcgctcccgggc
ttcggagacgtggcagaggcattcaccaactgggaagacgtatggaaggctctatga
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