Streptomyces clavuligerus: BB341_17500
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Entry
BB341_17500 CDS
T04717
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sclf
Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclf03021
]
BB341_17500
Transcription machinery [BR:
sclf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB341_17500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_23
HTH_Crp_2
HTH_3
DUF7343
HTH_24
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ANW19887
UniProt:
E2Q6B9
LinkDB
All DBs
Position
complement(4310744..4311664)
Genome browser
AA seq
306 aa
AA seq
DB search
MSPRLDPTTLSTTRAADRTGAAPAADGTGTIAETSTIAEIDGIGGIDRIGAIGAVDARAL
SKTLFARLARLEEGTHEHAYVRNTLVELNLSLVRFAAARFRSRSEPMDDIVQVGTIGLIK
AIDRFELSRGVEFPTFAMPTVIGEIKRFFRDTSWSVRVPRRLQELRLDLARAGDELTARL
DRSPTVAELAEYLGIGADEVVEGMVASNAYTPSSLDARPQNEEHDGTLAERIGYEDGGLE
GVEYIESLKPLIAGLPDRDRRILSLRFGADMTQSDIGEELGISQMQVSRLLSRTLVRLRR
GLTAED
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctggaccccaccaccctcagcacgacccgcgccgccgaccggaccggc
gcggcccccgccgccgacgggaccggcacgatcgccgagaccagcacgatcgccgagatc
gatggcatcggcggcatcgatcgcatcggcgcgatcggcgccgtcgacgcgcgcgccctc
tcgaagaccctgttcgcccggctcgcccggctcgaagagggcacccatgaacacgcgtac
gtccgcaacacgctggtcgagctgaacctctcgctcgtccggttcgccgccgcccgcttc
cgctcccgcagcgagccgatggacgacatcgtccaggtcggcaccatcggtctgatcaag
gcgatcgaccggttcgagctgagccggggagtggagttccccaccttcgccatgccgacc
gtgatcggcgagatcaaacgcttcttccgggacacgagctggtcggtccgggtgccccgg
cgcctccaggagctgcggctcgacctggcccgggccggggacgagctgaccgcgcggctc
gaccgctcccccaccgtcgccgagctggccgagtacctgggcatcggcgcggacgaggtg
gtcgagggcatggtcgcgagcaacgcgtacaccccgagttcgctggacgcccggccgcag
aacgaggagcacgacggcacgctggccgagcggatcggctacgaggacggcgggctcgaa
ggcgtcgagtacatcgagtcgctcaaaccgctgatcgccgggctgccggaccgggaccgc
cggattctctcgctccgcttcggtgccgacatgacccagtcggacatcggcgaggagctg
gggatctcccagatgcaggtctcccggctgctctcgcgcaccctggtccggctgcgccgc
ggcctcacggcggaggactga
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