Streptomyces clavuligerus: BB341_21740
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Entry
BB341_21740 CDS
T04717
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sclf
Streptomyces clavuligerus
Pathway
sclf03030
DNA replication
sclf03430
Mismatch repair
sclf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB341_21740
03430 Mismatch repair
BB341_21740
03440 Homologous recombination
BB341_21740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclf03032
]
BB341_21740
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_21740
Enzymes [BR:
sclf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB341_21740
DNA replication proteins [BR:
sclf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB341_21740
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB341_21740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
ANW20646
UniProt:
B5GXS0
LinkDB
All DBs
Position
5346741..5350280
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFSACKDMGMSHIAMTDHGNLHGAYDFFHQAKGA
GITPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANRTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQD
IFGKGRYFLELMDHGIEIERRVRDGLLEIGKKLDIPPLVTNDSHYTFDHEAGAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDQMYAIDSSDAWQEGCRNTLLVAEQIDTSGMFEAKN
LMPKFEIPAGFTEVTWFQEEVRTGMARRYPGGVPEDRQRQAEYEMDVIVSMGFPGYFLVV
ADFIMWAKKNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPAHPRYSEAGEIRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSEPITDHAPVWVRHSDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIELEMLSIPLDDPTTYELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGARKNGYSDEAVQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
QSNFAAQGDDVILFGLSAVRNVGTNVVESIIRCRKSKGKYSSFPDFLDKVEVVVCNKRTV
ESLIKAGAFDELGHTRKGLVAHHEPMIDNVVAVKRKEAEGQFDLFGGMGDDSADEPGFGL
DVEFSDVEWEKSYLLAQEREMLGLYVSDHPLFGIEHVLSDKSDASISQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMELMVPDLSSAGTNAPVVVTIPTVKVTPPMVTRLGEILSHHRGNTEVRI
KLQGPRTTTVLRLDRHRVQADPALYGDLKVLLGPACLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaccgccctttacgcatctgcatgtgcacacgcagtactcactgctggacggt
gcggcgcggctgaaggacatgttttccgcgtgcaaagacatgggcatgtcgcacatcgcg
atgaccgaccacggcaatctccacggcgcctacgacttcttccaccaggccaagggcgcg
gggatcaccccgatcatcggcatcgaggcgtatgtcgcccccgagtcccggcggaacaag
cggaagatccagtgggggcagccgcatcagaaacgggacgatgtctccggttccggtggt
tatacgcacaagacgatctgggcggccaaccggacgggtctgcacaacctcttccgcctc
tcctcggacgcgtatgccgagggctggctccagaagtggccccggatggacaaggagacc
atcgcccagtggtccgaggggctgatcgcctccaccggctgcccctccggcgagctccag
accaggctgcgcctcggccagttcgacgaggccctgaaggcggcctccgagtaccaggac
atcttcggcaagggccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgggacgggctgctggagatcgggaagaagctggacatccccccgctggtcacc
aatgactcccactacaccttcgaccacgaggcgggggcgcacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcacgggctactac
ctgaagtccacggaccagatgtacgccatcgactcctcggacgcctggcaggaggggtgc
cgcaacaccctcctggtcgccgagcagatcgacaccagcggcatgttcgaggcgaagaac
ctcatgccgaagttcgagatcccggcgggcttcaccgaggtcacctggttccaggaggag
gtcaggaccgggatggcccgccgctacccgggcggcgtccccgaggaccgccagcggcag
gccgagtacgagatggacgtcatcgtctcgatggggttcccggggtacttcctcgtcgtc
gccgacttcatcatgtgggcgaagaagaacggcatcgcggtcggccccggccgcggctcc
gcggcgggctcgatcgtcgcgtacgcgatggggatcaccgacctcgacccgatcgagcac
ggtctgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgatgtcgacatc
gacttcgacgagcgtcggcgcgtggaggtcatccgctatgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgcgatcaaggac
tcggcccgggtgctgggctacccctacgcgatgggcgaccggctcaccaaggccatgccc
gcggacgtcctcggcaagggcatcccgctctccggcatcctcgaccccgcgcacccccgc
tacagcgaggcgggcgagatccggggcatgtacgagaacgaaccggacgtcaagaaggtc
atcgacaccgcccggggcgtcgagggcctggtccgtcagatgggtgtgcacgccgcgggc
gtgatcatgtccagcgagccgatcaccgaccacgccccggtctgggtccggcactccgac
ggcgtcaccatcacccagtgggactatccgagctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcggaacctcaccatcatggacgacgccgtcaagatggtgaaggcg
aacaagggcatcgagctggagatgctctccatcccgctggacgaccccaccacctatgag
ctgctgtgccggggcgacaccctcggtgtcttccagttcgacggcggtccgatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtgtcggccctgtac
cgcccgggcccgatgggaatgaactcccatacgaactacgcgctgcgcaagaacaagcag
caggagatcaccccgatccacccggagctggaggagccgctcaaggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tacagcctgggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgaggag
ctggcgaagaacttcacgatcttccaggcgggcgcccggaagaacggctattccgacgag
gccgtccaggcgctctgggacgtcctggtgcccttcgccggatacgccttcaacaaggcg
cactcctccgcgtacggcctggtcacctactggaccgcctatctcaaggcgaatcacccg
gccgaatacatggcggcccttctgacctcggtcaaggacgacaaggacaagtcggcggtc
tatctgaacgaatgccgtcgcatgggcatcaaggtgctcccgccgaatgtcaatgaatcg
cagtcgaacttcgccgcccagggtgacgacgtcattctcttcggcctctcggccgtccgg
aacgtcggcaccaatgtggtggagtcgatcatccgctgccgcaagtccaaggggaagtac
tcatcgttccccgacttcctggacaaggtcgaggtcgtcgtctgcaacaagcggaccgtc
gaatcgctgatcaaggccggggccttcgacgagctgggccacacccgcaagggcctcgtc
gcccaccatgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgaggga
cagttcgacctcttcggcggcatgggcgacgacagcgccgacgagcccggcttcgggctg
gacgtggagttctccgacgtcgagtgggagaagtcctatctgctggcccaggagcgggag
atgctcgggctctatgtgtccgaccatccgctcttcggcatcgagcatgtgctgtccgac
aagtcggacgcgtcgatctcccagctcaccgggggtgagcacgcggacggcgcggtggtg
accatcggcggcatcatctccgggctccagcgcaagatgaccaagcagggcaacgcgtgg
gccatcgccaccgtggaggacctggcgggctccatcgagtgcatgttcttccccgctacc
tatcagctcgtctccacccagctcgtcgaggacacggtggtcttcgtcaaggggcggctg
gacaagcgcgaggacgtaccgcggctggtcgcgatggagctgatggtccccgacctctcc
tcggccgggaccaacgcgcccgtggtcgtcaccattcccaccgtgaaggtgaccccgccg
atggtcaccaggctgggggagatcctcagccaccaccggggcaacaccgaggtgcggatc
aagctccaggggccgcgcacgacgaccgtgctccggctggaccggcaccgggtgcaggcg
gacccggcgctctacggcgatctgaaggtgctgctcggcccggcctgcctggccggctga
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