Streptomyces clavuligerus: BB341_22120
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Entry
BB341_22120 CDS
T04717
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sclf
Streptomyces clavuligerus
Pathway
sclf03030
DNA replication
sclf03410
Base excision repair
sclf03420
Nucleotide excision repair
sclf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB341_22120
03410 Base excision repair
BB341_22120
03420 Nucleotide excision repair
BB341_22120
03440 Homologous recombination
BB341_22120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclf03032
]
BB341_22120
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_22120
Enzymes [BR:
sclf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB341_22120
DNA replication proteins [BR:
sclf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BB341_22120
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BB341_22120
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB341_22120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ANW20711
LinkDB
All DBs
Position
5439951..5442605
Genome browser
AA seq
884 aa
AA seq
DB search
MDGHSLAYRAFFALPAENFSTASGQTTNAIYGFASMLANTLRDEAPTHFAVAFDVSRKTW
RSKDYPEYKANRSATPDEFKGQVELIGELLDTMNAVRFAVDGFEADDIIATLATQAEAEG
FDVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPEKVQEKYGLTPSQYPDFAALRGD
PSDNLPGIPGVGEKTAAKWINQFGSFAELVERADEVKGKVGQSFRDHLEAVKLNRHLTEL
VRDVELAKPVAGLERAPYDRSALKNFLEILEIRNPSLRERLLAVDPGATEDEAPAPEAGI
ELDGSVLATGELAPWLESHGAQPLGVATVTSWSLGTGQVSEIALAAADGKAAWFDTTRLD
EADERAFAAWIADPARPKVMHNAKDALRVFPEHGWRVDGITMDTALAAYLVKPGRRSFAL
DALSVEYLHRELVPAAADGQLAFGTDEHAEADALMAQARAVLDLGDAFTARLEEVGATEL
LHDMELPTSELLARMERHGIAADRAHLESMEHLFAGAVQQAVKEAHATVGHEFNLGSPKQ
LQEVFFGELNLPKTKKTKTGYTTDADALAWLAGQTEHELPVIMLRHREQARLRSTVEGLI
KTVAADGRIHTTFSQTVAATGRLSSTDPNLQNVPVRTDEGRAIRRGFVVGEGFESLMTAD
YSQIELRVMAHLSQDEGLIRAFTSGEDLHNTVASQVFGVATSEVDAEMRRKIKAMSYGLA
YGLSAFGLSQQLNIEAGEARALMDTYFERFGGVRDYLRHVVDEARATGYTATMLGRRRYL
PDLNSDNRQRREAAERMALNAPIQGTAADIVKIAMLRVDRALREAGLSSRLLLQVHDEIV
LEISPGERDEVETIVRREMSSAVELSAPLDVSVGVGADWESAAH
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcactccctggcgtaccgggcgttcttcgcgctgcccgcggagaacttctcg
accgcgagcggccagacgaccaacgccatctacggcttcgcgtcgatgctggcgaacacc
ctgcgtgacgaggcgccgacccacttcgccgtggcgttcgacgtctcccgcaagacctgg
cgctcgaaggactaccccgagtacaaggcgaaccgctccgcgacccccgacgagttcaag
ggccaggtcgagctgatcggcgagctgctcgacaccatgaacgcggtgcgcttcgcggtc
gacggcttcgaggcggacgacatcatcgccaccctcgccacccaggccgaggccgagggc
ttcgacgtcctgatcgtcaccggggaccgggactccttccagctcgtcagcgagcacacc
accgtgctctaccccaccaagggggtctccgagctgacccgcttcaccccggagaaggtc
caggagaagtacgggctcaccccgagccagtaccccgacttcgccgccctgcgcggcgac
ccctccgacaacctccccggcatccccggcgtcggcgagaagaccgccgccaagtggatc
aaccagttcggctccttcgccgagctggtcgaacgggccgacgaggtcaagggcaaggtc
ggccagtcgttccgcgaccacctggaggccgtcaagctcaaccgccacctgaccgagctg
gtccgcgacgtcgaactggcgaagccggtcgccgggctggagcgcgccccctacgaccgc
tccgcgctgaagaacttcctggagatcctggagatccgcaaccccagcctgcgcgagcgg
ctgctggcggtcgaccccggcgccaccgaggacgaggcccccgcccccgaggcgggcatc
gagctggacggctcggtactggccaccggggagctggcgccctggctggagagccacggg
gcgcagccgctcggcgtggccaccgtgacgagctggtccctgggcaccggccaggtctcc
gagatcgccctcgccgccgccgacggcaaggcggcctggttcgacaccacccggctggac
gaggccgacgagcgcgccttcgccgcctggatcgcggaccccgcccgccccaaggtgatg
cacaacgccaaggacgccctgcgggtcttccccgagcacggctggcgcgtcgacggcatc
accatggacaccgccctcgccgcctacctcgtcaagcccggccgccgctccttcgccctc
gacgccctctccgtcgaatacctccaccgcgaactggtcccggccgccgccgacggacag
ctcgccttcggcaccgacgagcacgccgaggccgacgccctcatggcccaggcccgtgcc
gtgctcgacctcggcgacgccttcaccgcgcggctggaagaggtcggcgccaccgagctg
ctgcacgacatggagctgcccacctccgaactgctggcccggatggagcgccacggcatc
gccgccgaccgggcccatctggaatcgatggaacacctcttcgcgggcgccgtgcagcag
gccgtgaaggaggcccacgccaccgtcggccacgagttcaacctcggctcgcccaaacag
ctccaggaggtcttcttcggcgagctgaacctccccaagacgaagaagaccaagaccggc
tacaccaccgacgcggacgcgctcgcctggctcgccggccagaccgagcacgaactgccg
gtgatcatgctgcgccaccgggagcaggcccggctgcgctccaccgtcgagggcctgatc
aagaccgtcgccgccgacggcaggattcacaccaccttcagccagaccgtcgcggcgacg
ggccgtctctcctccacggacccgaacctccagaacgtcccggtgcgcaccgacgagggc
cgggccatccgccggggcttcgtcgtcggcgagggcttcgagtccctgatgaccgccgac
tacagccagatcgaactgcgggtgatggcgcacctctcccaggacgaggggctgatccgg
gccttcacctccggcgaggacctgcacaacacggtcgcctcccaggtgttcggcgtggcg
acctccgaggtcgacgcggagatgcgccggaagatcaaggcgatgtcctacgggctggcc
tacggcctgtcggcgttcggtctctcccagcagctcaacatcgaggcgggcgaggcccgg
gccctgatggacacctacttcgagcggttcggcggggtccgggactacctccgccatgtc
gtggacgaggccagggccaccggctacaccgcgacgatgctcggccgccgccgctacctg
cccgacctcaacagcgacaaccgccagcgccgcgaggccgccgaacgcatggcgctcaac
gccccgatccagggcacggcggccgacatcgtcaagatcgcgatgctccgggtggaccgg
gcgctccgcgaggccggcctctcctcccggctgctgctccaggtccacgacgagatcgtg
ctggagatctccccgggcgagcgcgacgaagtcgagacgatcgtgcgccgcgagatgtcc
tccgctgtggagctgagcgcaccgctggacgtctcggtcggcgtgggcgcggactgggag
tcggccgcccactga
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