Streptomyces clavuligerus: BB341_24485
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Entry
BB341_24485 CDS
T04717
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sclf
Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclf03021
]
BB341_24485
Transcription machinery [BR:
sclf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB341_24485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
MarR_2
HTH_Crp_2
HTH_23
HTH_37
NirdL-like_HTH
KORA
HVO_2718
GntR
HTH_3
MarR
Sigma70_ECF
DUF7343
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ANW21139
UniProt:
B5H1D0
LinkDB
All DBs
Position
5990280..5991149
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AA seq
289 aa
AA seq
DB search
MSTASQVTTGLIDGTRCPSPELDLPEVTNPGEVAPRDAREISRIFFERLAHLDEGTRDHQ
YVRNTLIELNLALVKYAAGRFRNRAEQMEDIIQVGTIGLIKAIDRFELSREVEFATFAVP
YIVGEIKRFFRDTSWAVHVPRRLQELRIDLAKATDDLSQRLDRSPTTRELAEHLGIDEQE
VIEGVVAANGYTAGSIDMPLEDSSDHTTSSLSDRLGAPDAGLEIAENVQALKPLIEELGE
RDRRILRMRFGEELTQSEIGAELGVSQMHVSRLLTRITTRLREGLLASG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacggcgagccaggtcacgaccggactcatcgacggaacacggtgcccgagccca
gagctggacctgccggaggtgacgaaccccggcgaagttgcgccccgggacgcccgtgag
atctcccggatcttcttcgagcggctggcacacctggacgagggcacccgcgaccaccag
tacgtccgcaacaccctcatcgagctcaacctggcgctggtgaagtacgccgccggacgg
ttccgcaaccgggccgagcagatggaggacatcatccaggtcggcacgatcggcctgatc
aaggcgatcgaccggttcgagctgagccgtgaggtggagttcgcgaccttcgccgtcccg
tacatcgtcggggagatcaagcggttcttccgggacacgagctgggccgtgcatgtgccc
cggcgcctccaggagctgcggatcgacctggccaaggccaccgacgacctctcccagcgg
ctggaccgctcgccgaccacccgggagctggccgagcacctcggcatcgacgagcaggag
gtcatcgagggcgtcgtcgccgccaacggctacacggccggctcgatcgacatgcccctg
gaggactcctccgaccacaccaccagctcgctctccgaccggctgggcgcacccgacgcc
ggtctggagatcgccgagaacgtccaggcgctcaagccgctcatcgaggaactgggcgaa
cgggaccgccgcattctgcggatgcgcttcggcgaggagctgacccagtcggagatcggc
gccgagctgggggtctcccagatgcatgtgtcccggctgctgacccggatcaccacccgg
ctccgcgaggggctgctcgcgagcggctga
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