Streptomyces clavuligerus: BB341_25125
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Entry
BB341_25125 CDS
T04717
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sclf
Streptomyces clavuligerus
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_25125
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BB341_25125
Archaeal homologous recombinant proteins
BB341_25125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
Motif
Other DBs
NCBI-ProteinID:
ANW21254
UniProt:
E2Q9K9
LinkDB
All DBs
Position
6141537..6145556
Genome browser
AA seq
1339 aa
AA seq
DB search
MRLHRLTVTAFGPFGATQEIDFDALSGAGIFLLHGATGAGKTSVLDAVCFALYGAVPGAR
QSPGTSLRSDHAPAGTPTEVLLDLTVGGRRLEIRRRPAQPRPKKNGRGVTTERAQSQLRE
YDAEQGAWRALSRSHQEIGEEITQLVGMSREQFCQVVLLPQGDFARFLRSDAEARARLLG
RLFDTGRFAAVEERLAERRRTAEGRVRTADEGLLAIAHRMEQAAGAAADDWPPPRQQPGD
PGLADAVLEWAAVARAGAAERRDIAEGALTAAEHRQRAAREALESAQEEERLQRRYEDAR
RRRAVLEDRRPEYEELCDRLDRARRAERVAPALRLRDDAAREHTVAGTAYEEARALLPAE
LREAGAEQLAAAEARLRQDLGGLEAALRAERRSEEITRERAALDRQARADEEILQDAEGW
LAGWEALRHGHQERIAAAQDAATRAEHLAGRLDPARRRLRAARERDRLAVLGVTAEEGLR
TARDRAGRAREQWLDLKERRLLGIAAELAAELAPGRPCTVCGSAEHPEPARPTDGSVTAA
QEDSAYDHYTRADAAKATAERELAVLTEALTTARTQARSVSPPTGTSSSPANGTGGPDRS
PATAAPASGASGASGSGTAVVTPGTGPAGPVAAGAAARAGGGESGRLPGPVDSGRARGAD
AVGGAVAGGPANGSDTAGGFRVPVAAAGGGAGGVPVATDGVGGPDTSGVRTGGPGRFPGA
GKPDRLSGGPACGAAGPAGPGSSVVPVAAAGEGPEGMDAAGGFRVPVADAGAGGAPVPTD
GVGGPGGTAGPVGAGAGAGEAGPFGVVGGGSGGADGEPSATGESVPAPSGGDRAVGGSVG
GGVPGRAQGAGGSVAPMVAGGGAAGAAGRVSGTGGDGAENGSVDGGRSAGGRGAPRDAPV
AVDGAVPRARGAGEEYDPTVRELEALVVRLEEEYGRAHRTAGGGHSAREALDRAEREHRE
RLADRQETERRVAARTSRREALDREQGALLAELAHLDDGTGVSARAALLERRVRLLARAA
GAVREADTAARRLKVADDRLASAVFDADLGTPSAAADALLPAAALRDVQSRVDAWRTEAA
AVADRLDEPGTRAAGERPPVDSAAARTGYDRAERALREAVSALDSARERRAELARLSARA
VTAVRGLGPLREEYDRVARLAGLTAGTSADNERRMRLESYVLAARLEQVAAAASVRLRRM
SSGRFTLVHSDARSGGRRSGLGLHVVDAWTGAERDTATLSGGETFFASLALALGLADVVT
EEAGGVRLDTLFVDEGFGSLDEQTLDEVIDVLDALRERDRCVGIVSHVADLRRRVPTRLE
VVKARGGSTVRLHTAPLDG
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccaccggctcaccgtcaccgcgttcggccctttcggagccacccaggagatc
gatttcgacgcgctctccggcgcggggatcttcctgctgcacggcgcgaccggcgcgggc
aagacctctgtgctcgacgcggtctgcttcgcgctgtacggggcggtccccggcgcccgg
cagagccccgggacctcgctgcgcagcgaccacgccccggcgggcacccccaccgaggtg
ctgctcgacctgaccgtgggcggtcggcggctggagatccgccgcaggcccgcacagccc
cgtcccaagaagaacggcaggggcgtcaccaccgagcgggcccagagccagctccgcgag
tacgacgccgagcagggcgcctggcgcgcgctcagccgctcccaccaggagatcggggag
gagatcacccagctcgtcgggatgagccgggagcagttctgccaggtggtgctgttgccg
cagggggacttcgcccgttttctgcgctccgacgccgaggccagggcgcggctgctcggc
cgtctcttcgacaccggccgcttcgccgccgtggaggagcgcctcgccgagcggcggcgc
accgccgaggggcgggtccgcaccgcggacgaggggcttctcgcgatcgcccaccgcatg
gagcaggccgcgggcgcggcggcggacgactggccgccgccccggcagcagcccggcgac
cccggtctcgcggacgccgtcctggagtgggccgccgtcgcccgcgcgggagccgccgag
cgccgggacatcgccgaaggagcgctgaccgcggcggagcaccgccagcgggcggcgcgc
gaggcactggagtcggcccaggaggaggagcggctccagcggcggtacgaggacgcccgc
cgccgccgtgccgtcctggaggaccggcggcccgagtacgaggagctgtgcgaccgtctg
gaccgcgcccggcgggcggagcgggtcgcgcccgcgctgcggctgcgcgacgacgcggcc
cgcgagcacaccgtggcgggcaccgcgtacgaggaggcccgcgccctgctcccggccgag
ctgcgggaggcgggggccgagcagctcgccgccgccgaggcccggctgcgccaggacctc
ggcggccttgaggcggctctccgggccgagcggcgcagcgaggagatcacccgggagcgc
gccgcgctggaccgccaggcccgagcggacgaggagatcctccaggacgcggaggggtgg
ctcgcgggctgggaggccctgcgccatggacaccaggagcggatcgccgccgcacaggac
gcggcgacccgcgccgaacacctcgcgggtcggctcgaccccgcccgccgacggctgcgc
gccgcgcgggaaagggaccggctcgcggtcctcggagtgacggccgaggaggggctgcgc
accgcccgcgaccgtgcgggccgggcccgcgagcagtggctcgacctcaaggaacgacgg
ctgctcggcatcgccgccgagctggccgccgagctggccccgggccgcccgtgcaccgtc
tgcggctccgccgagcacccggaaccggcccgtccgaccgatggctccgtgaccgcggcg
caggaggactccgcgtacgaccactacacccgcgcggacgccgccaaggccaccgccgaa
cgcgaactcgcggtcctcaccgaggccctgaccaccgcccgtacccaggcccggtccgtc
tctccgccgacgggcacgtcttcgtccccggcgaacgggaccggcggacccgaccgctcc
ccggccaccgcggcccccgcgtccggggcgtccggggcgtccgggtcgggtacggcggtg
gtgacacccggtaccggtccggccggtccggtcgccgcaggcgcggctgcgcgtgccgga
ggcggtgaatccggccgcctgcccggtcctgtggactcgggccgggcacgcggagccgac
gcggtgggtggtgcggtggccggtgggcccgcgaacggctcggacaccgcgggtggtttc
cgcgtaccggtggcggcggccggtggcggtgccggtggtgtgccggtcgcgacggacggt
gtgggtggcccggacacctcgggtgtgaggaccggtgggcccggtcgcttcccgggcgcc
gggaagccggaccggttgtccggtgggcccgcgtgcggtgcggctgggcctgccgggccg
ggcagttccgtggtgccggtcgcggcggccggggaaggcccggaaggcatggacgctgcg
ggtggtttccgcgtaccggtggcggatgccggtgccggtggtgcgccggtcccgacggac
ggtgtgggtggcccgggtggcaccgccggtccggtcggcgcgggtgcgggtgccggggag
gccggtccgttcggcgtggtcggtggcggttccggtggtgcggacggtgagccttccgcc
accggggagtcggttccggccccgtccggaggggacagggcggtcggcgggtccgtgggc
ggcggggtgccgggccgggcccagggcgcgggtggctctgtcgcaccgatggtggccggt
ggtggtgcggccggtgcggccggtcgggtttccggcaccggaggggacggggccgaaaac
gggtccgtggacggcgggcggtccgccggtgggcggggcgccccgagggacgcgcccgtc
gcggtggacggtgccgttccgcgggcacggggggccggggaggagtacgaccccaccgtg
cgtgagctggaggcgctggtcgtccggctggaggaggagtacgggcgggcgcatcggacc
gcggggggcgggcacagtgcgcgggaggcgctcgaccgggccgagcgggagcaccgggag
cggctggcggaccgtcaggagaccgagcggcgggtggcggcgcggacctcgcggcgggag
gcgctcgaccgggagcagggcgccctcctcgccgagctggcgcatctcgacgacggcacc
ggcgtctccgcccgcgccgcgctgctggagcgccgggtgcggctgctcgctcgggccgcc
ggggccgtccgggaggcggacaccgccgcgcggcggctgaaggtggccgacgaccggctc
gcctccgccgtgttcgacgcggacctcggcaccccgtcggccgccgccgacgcgttgctc
cccgccgccgcgctgcgcgacgtccagtcccgcgtcgacgcctggcgcaccgaggccgcg
gcggtcgccgaccggctcgacgagcccgggacccgggccgcgggggagcgtccccccgtc
gactccgccgccgcccgcaccgggtacgacagggccgaacgtgccctgcgcgaggctgtg
tccgcgctcgactccgcccgtgagcgccgtgccgagctggcgcggctctccgcgcgggcc
gtcaccgccgtgcgggggctcggcccgctgcgcgaggagtacgaccgggtcgcccggctc
gcggggctcaccgcgggcacctccgccgacaacgagcgcaggatgcggctggagtcgtac
gtcctggcggcccggctcgaacaggtcgccgccgccgcgtccgtacggctgcggcgcatg
tcgtccggccgctttaccctggtccactccgatgcccgctccggcggcagacgttcgggc
ctcgggctccatgtcgtggacgcctggaccggggccgagcgggacacggcgaccctctcc
ggcggcgagaccttcttcgcctcgctggcgttggcgctgggcctcgccgacgtggtcacc
gaagaggccgggggcgtacggctcgacaccctcttcgtcgacgagggcttcggcagcctg
gacgagcagaccctcgacgaggtcatcgacgtcctcgacgcgctgcgcgaacgggaccgc
tgcgtcggcatcgtcagccatgtcgccgacctccgacgccgtgttcccacccggctggag
gtggtcaaggcacgggggggctccacggtccggctgcacaccgccccgctggacggctga
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