Sphingobium cloacae: SCLO_1002270
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Entry
SCLO_1002270 CDS
T05301
Name
(GenBank) penicillin binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo00550
Peptidoglycan biosynthesis
sclo01100
Metabolic pathways
sclo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCLO_1002270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCLO_1002270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sclo01011
]
SCLO_1002270
Enzymes [BR:
sclo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SCLO_1002270
Peptidoglycan biosynthesis and degradation proteins [BR:
sclo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCLO_1002270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF7440
dCache_1
Motif
Other DBs
NCBI-ProteinID:
BAV63267
UniProt:
A0A1E1EYB8
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All DBs
Position
SCLO_1:complement(252231..254291)
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AA seq
686 aa
AA seq
DB search
MKFIRSKRKIVTEATQTFTFTRRAMVVGGLQGAFGLMLAGRMAWISVAQNEKYNLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPERVKDADATIRNLAELLALEAEEIE
RIKEELEKSPGFRPVQVADKLSYDQYAAVSVRLPDLPGVAPSQGFSRYYPAGASVGHLLG
YVGAASAKEYEERKNPLLITPGFKIGKDGLERAFDKELTGKPGAKRVEVTARGKIVRELT
TRPDIPGNTIRLTIDAGLQEYAGRRLATQSGSVVILDCRNGDVLAMASMPSFDPNSFSDG
ISHLEWDMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGVHPSETVGCAGAIRVG
NTLFHCHKRRGHGAVNMRTAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFDLPFPS
QSYGTVPDPAWKLKKYGQSWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFI
LDAERPAPESVGASEDHLVVIRDAMSAVVNGGGTGGAARINIPGVLLAGKTGTAQVRRIT
MAERAGGVRGNASLPFKLRDHALFQGFVPFDNPRYAVGCIIEHGGHVNRIEDAPMICADT
LSYLFDPKKAMEKLETLEKGWGGTPAERLARQTAAFRLSKAIEKGEVPASAAGNATQAAN
AAAPAATPAEEDGDAPPPASSPTGAP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcatccggtccaagcgcaagatcgtcaccgaagccacccagaccttcaccttc
acgcgacgggcgatggtggtgggcgggctgcaaggcgccttcggcctgatgctcgccggg
cgcatggcgtggatcagcgtggcgcagaacgagaaatacaaccttctttccgaaagcaac
cgcgtcaacctgacgctcattccgccgcggcgcgggtggatcatcgaccgtaacggcagg
ccgctggccaataaccgcaccgatttccgcgtcgacctgatccccgagcgcgtcaaggat
gccgacgccaccatacgcaacctggccgagctgctggcgctggaagcggaggagatcgag
cggatcaaggaggagctggagaaatcccccggcttccgcccggtgcaggtcgccgacaag
ctgagctacgatcaatatgcggcggtcagcgtgcgcctgcccgacctgcccggcgtcgcg
ccgagccagggcttttcccgctattatccggcgggcgcatcggtggggcatctgctgggc
tatgtcggcgcggcgtccgcaaaggaatatgaggaacgcaagaacccgctgctcatcacc
cccggcttcaagatcggcaaggacgggctggaacgggcgttcgacaaggaactgaccgga
aagcccggcgccaaacgggtcgaagtcaccgcgcgcggcaagatcgtgcgcgaactgacc
acgcgcccggacatacccggcaacaccatccgcctcaccatcgacgcgggattgcaggaa
tatgcgggccgccgcctcgccacgcagagcggatcggtggtcatcctggattgccgcaac
ggcgatgtgctggccatggcgtccatgcccagtttcgatcccaacagcttttcggacggc
atcagccatctggaatgggacatgctgtcgaaggacgaccatgtccccctgcgcaacaag
acgctgcaagggctgtatccgccaggctccacagtcaaacccatggtggcgctcgcgctg
ctggaagcgggcgtgcatccgtccgagacggtgggctgcgcgggcgcgatcagggttggc
aacacgctgttccactgtcacaaaaggcgtggccatggcgcggtgaacatgcgcacggcc
atcgcccagagctgcgacatctatttctaccagatggcccagcgcatcggcatggaccgc
atcgccagcatggcccggcgcgtgggcatggggcagaaattcgacctgcccttccccagc
caaagctatggcacggtgcccgatccggcatggaagctgaaaaaatacggccagtcctgg
caggtgtacgacaccgtcaacgccacgatcggccaaggctatatgctcatcaatccgttg
cagatggccgtcatggcggcgcggctggcgaccgggcggcagttgatgcccaatttcatc
cttgacgcggagcggcccgcgccggaatcggtcggcgcttcggaagaccatctcgtcgtc
atccgcgacgcgatgagcgcggtggtgaacggcggcggaaccggcggcgcggcgcggatc
aacattcccggcgtgctgctggcgggcaagacgggcacggcgcaggtccgccgcatcacc
atggccgagcgcgcgggcggggtccgcggcaatgcctccctgcccttcaagctgcgcgac
catgcgctgttccagggctttgtgccgttcgacaatccgcgctatgcggtgggctgcatc
atcgagcatggcggccacgtcaaccggatcgaggacgcgccgatgatctgcgccgacacc
ctgtcctatcttttcgacccgaagaaagcgatggagaagctggaaacgctggaaaagggc
tggggcggaacgcccgccgagcggctggcgcggcaaaccgccgccttccgcctttccaag
gccatcgagaagggcgaagtccccgcctctgccgccggcaatgcgacgcaggccgcaaac
gccgccgcgcccgcggccacgccggcggaagaagatggcgacgcgccgcctcccgcatcg
agcccgacaggcgcgccatga
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