Sphingobium cloacae: SCLO_1003730
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Entry
SCLO_1003730 CDS
T05301
Name
(GenBank) type IV secretion-system TraD DNA-bindingdomain-containing protein
Organism
sclo
Sphingobium cloacae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
T4SS-DNA_transf
TraG-D_C
AAA_16
AAA_19
AAA_22
FtsK_SpoIIIE
DUF87
AAA_5
AAA_30
AAA_7
Zeta_toxin
PIF1
nSTAND3
IstB_IS21
DUF815
AAA_28
AAA
AAA_24
bpMoxR
RuvB_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAV63413
UniProt:
A0A1E1EYS9
LinkDB
All DBs
Position
SCLO_1:410287..412437
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AA seq
716 aa
AA seq
DB search
MSIFRNDTLGSWTRGGQAIVHNVRMTTQVFFQTVLAGLILWLMGTCWYAFEKSTDYQRFV
LAKLVEATIKADAAPGTNDPVLFRTPDGRQYWTSADTLADSGVAKQALHKLEKDLIHGAA
IAGVVALFGLVSAWFYFTRTGKGLGSNEYLRGARFGTASEVRRALRGQKKGALTIGGVAV
PEAFEPEHILLVGAPGTGKTNLITTMLEGIRKQGKRAIVYDTAGSFVEKFYRPGRDILLN
PLDKRTDIWSPWVDVPREYHYDQIAESTIPDKHGDPFWSKAARGTLVAVLRKLARQKHTL
ISVLLDRVLRSPLADLAAYVKGTDAAAFISAEGERTSAGVQAELASVMRSFAYLDDTEDG
FSIRRWVEDEKDDSWLFVTVKADQLPSLRPLITVWLDIAISAIMSLTPDRDRRLYCVIDE
LPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLTATYGKEDAAAITGYCSTWVALRAND
SDTSELISKNLGRVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVLDTEVTHLPNLSGF
LRFGRNLPVVRFTDRFNPLPSIAAAFVERTEPPKRLPLGKAIISQAWAERRARQAREEAA
RRGQGPGHPDTPPSPGTGQGDLFTGEANPPPAREPTQEPPSLPDPQDAVPQDEVFGPTDH
SDSGMTDEGAPIDDHPDEENRVATPIPLLGATRGTIRVRLDSHGRSEGPREKAKPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcttccgcaacgacacgttggggagctggacgcggggcgggcaggcgatcgtc
cacaatgtccgcatgaccacccaggtctttttccagaccgtgctggccgggctgatcctc
tggttgatggggacctgctggtatgcgttcgaaaagtcgaccgactatcagcgcttcgtc
ctcgccaagctggtggaggcgaccatcaaggcggatgcggcgccggggaccaatgacccg
gtgctgttccgcacccccgacgggcgccaatactggacctcggccgacaccctcgccgac
tccggtgtcgcgaagcaggcgctccacaaactcgaaaaggacctcatccacggggcggcc
attgccggtgtggtcgccctcttcggactggtcagtgcctggttctattttaccagaact
gggaaggggctcggctccaacgaatatctgcgcggcgcccgcttcgggacggcctcggaa
gtgcggcgcgcgctccgggggcagaagaagggggcgctcacaatcggcggcgtcgccgtg
ccggaagccttcgagcccgaacatatcctgctggtcggcgctccaggaacgggcaagacc
aacctcatcaccaccatgctcgaaggcatccgcaagcagggtaagcgggcgatcgtctat
gacacggccgggagcttcgttgagaaattctatcgccccggcagggacatcctgctcaac
ccgctcgacaagcgcaccgacatctggagtccctgggtcgatgttccgcgggagtatcat
tacgaccagatcgcggaatctacgatccccgacaaacatggcgatccgttctggagcaag
gccgcgcgcggcacgctggtcgccgtcctgcgcaagctcgcgcggcagaagcacacgctc
atctcggtcctgcttgatcgggtgctgcgttccccgctcgccgatcttgccgcctatgtg
aagggcaccgatgccgccgctttcatctccgccgagggagagcgcacctcggccggcgtc
caggccgagcttgcctcggtcatgcgcagcttcgcctatctcgacgataccgaggacggc
ttctcgatccggcgttgggtcgaggacgagaaggacgacagctggctgttcgtcaccgtc
aaggccgaccagcttccttcgctgcgccccctgatcacggtctggctcgacatcgcgatc
agcgcgatcatgagcctcacgcccgaccgcgaccggcggctctattgcgtcattgacgaa
ttgccgacgctccagaagctccccagcctatccgacttcctcgcccgtgcgcgcaaatat
ggcggctgcggcatattggggttccagtcctatccccagctgaccgcgacctacggcaag
gaggatgcggcggccatcaccggctactgctcgacctgggtcgcgctccgggcgaacgat
agcgacacctcggaacttatctccaaaaaccttggccgggtcgagcaggtcgaagccaac
gaggggatgagctacggcgtcaatgacatgcgcgacggggtgaacctcagtcgcatgcag
gtgacccgcccgctggttctggacaccgaggtcacccatctgccgaacctttcgggtttc
ctccgtttcgggcgcaatctccccgtcgtccgtttcaccgatcgcttcaatccgctgcct
tcgatcgcggccgcgttcgttgaacgcaccgagccccccaaaaggctgccgctcggcaag
gccatcatctcccaggcgtgggcagagcgccgcgcgcgccaggcgcgggaggaggccgcg
aggcgagggcagggtccgggacatccggacacgccgccgtctcccggaacggggcaaggc
gatctttttaccggcgaggccaatcccccgccggcgcgggagccgacccaggagccgccc
agcctgccggatccccaggacgccgtgccgcaggatgaggtgttcggacccaccgaccac
agcgattccggcatgacggacgagggagcgccgatcgacgatcatcccgacgaggagaac
agggttgccacccccatccccttgttgggggcgacgcgcggcacgatccgtgtgcggctc
gacagccatggccgttccgaaggcccgcgtgagaaggcgaagccggcatga
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