Sphingobium cloacae: SCLO_1005110
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Entry
SCLO_1005110 CDS
T05301
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclo03021
]
SCLO_1005110
Transcription machinery [BR:
sclo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCLO_1005110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
ARA70
Sigma70_r3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BAV63551
UniProt:
A0A1E1EZA6
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All DBs
Position
SCLO_1:complement(574074..574988)
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AA seq
304 aa
AA seq
DB search
MADKSNVPTVPALGGEASLNRYLSEIRKFPLLTPEQEYMLAKRYQEHQDPEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEADRGFRLATYAMWWIRASIQEFI
LRSWSLVKMGTTAAQKKLFFNLRRMKNNIEAFEDGDLHPDDVRKIATDLGVSEDDVVSMN
RRMAMGGDTSLNVPMREDGEGQWQDWLADTDPLQDERVADEQEREMRHDMLVEAMDDLND
REKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGDRLGQMAR
LAAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagcaatgtccctacggtgccagcgctgggcggtgaagccagcctgaac
cgctatctgtcggaaatccgcaaatttccgcttctgactccggagcaggagtatatgctc
gcgaagcgctatcaggaacatcaggaccctgaggccgcggcgcagctcgtgacgtcgcat
ctgcgcctggtggcgaagatcgcgatggggtatcgcggctacggactgccggtcagcgaa
ctgatctccgaaggcaatatcggcctgatgcagggcgtgaagaagttcgaggccgatcgc
ggcttccggctcgccacctatgcgatgtggtggattcgcgcctcgatccaggaattcatc
ctgcggtcgtggagcctcgtgaagatgggcaccacggcggcgcagaagaagctgttcttc
aacctgcgccggatgaagaacaatatcgaagcgttcgaggatggcgacctgcatcccgac
gacgtcaggaagatcgcgaccgatctgggcgtgtcggaagacgatgtggtgtcgatgaac
cgccgcatggcgatgggcggcgacacgtcgctcaacgtgccgatgcgcgaggatggcgag
ggccagtggcaggattggctggccgacaccgatccgttgcaggacgaacgcgtcgccgac
gagcaggagcgcgaaatgcgccacgacatgctggtcgaggcgatggacgacctcaacgac
cgggaaaagcatatcctggccgaacggcgcctggcggaagagcccaagacgctggaggag
ttgtcgcaggtctatggcgtcagccgcgagcgggtccgccagatcgaagtgcgcgctttc
gagaagctgcaaaaggcgatgatgcggatcgcgggcgaccggctcggccagatggcgcgg
ctcgccgctgcttaa
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