Sphingobium cloacae: SCLO_1005980
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Entry
SCLO_1005980 CDS
T05301
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo00260
Glycine, serine and threonine metabolism
sclo00460
Cyanoamino acid metabolism
sclo00630
Glyoxylate and dicarboxylate metabolism
sclo00670
One carbon pool by folate
sclo00680
Methane metabolism
sclo01100
Metabolic pathways
sclo01110
Biosynthesis of secondary metabolites
sclo01120
Microbial metabolism in diverse environments
sclo01200
Carbon metabolism
sclo01230
Biosynthesis of amino acids
sclo01240
Biosynthesis of cofactors
sclo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SCLO_1005980
09102 Energy metabolism
00680 Methane metabolism
SCLO_1005980
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SCLO_1005980
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SCLO_1005980
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SCLO_1005980
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SCLO_1005980
Enzymes [BR:
sclo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SCLO_1005980
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAV63638
UniProt:
A0A1E1EZD7
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All DBs
Position
SCLO_1:complement(686858..688168)
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AA seq
436 aa
AA seq
DB search
MSTATLDHAAIRSEGYFTRSLADADPAVFAGVTKELKREQNQIELIASENIVSKAVLEAQ
GSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKQLFNCGFVNVQPHSGAQANGAVML
ALTKPGDTIMGLSLDAGGHLTHGARPALSGKWYNAVQYGVREDTHLIDYDALEAQAIEAK
PTLIIAGGSAYPRHIDFARFRAIADKVGALFMVDMAHFAGLVAGGAHPTPFGHAHIVTTT
THKTLRGPRGGMILTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYA
RAIVTNAKALAGKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCNKNG
VPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLQGLRDKGEAGDPAVEANV
RERVSALTARFPIYEG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgccaccctcgatcatgccgccatccgttcggaaggctatttcacgcgcagt
ctggccgatgccgatccggcggtcttcgcgggcgtcacgaaggaactgaagcgcgagcag
aaccagatcgaactgatcgcgtcggaaaatatcgtcagcaaggcggtgctggaggcgcag
ggatcggtcttcaccaacaaatatgcggaaggctatccgggcaagcgctactatcagggc
tgcgccccttcggacgaggtggagcaactggccatcgaccgcgccaagcagcttttcaat
tgcggattcgtcaatgtgcagccgcattcgggcgcgcaggcgaacggcgcggtgatgctg
gcgctgaccaagccgggcgacacgatcatgggcctgtcgctggacgcgggcggacacctg
acccatggcgcgcgacctgccctgtcgggcaaatggtataatgccgtccaatatggcgtg
cgcgaggacacgcatctcatcgattatgacgcgctggaagcgcaggccatcgaggcgaag
ccgacgctcatcatcgcgggcggcagcgcctatccgcgccatatcgacttcgcgcgcttc
cgggcgatcgcggacaaggtgggcgcgctgttcatggtggacatggcgcatttcgcgggc
ctcgtcgcgggcggggcgcacccgacgcccttcggccacgcccatatcgtcaccaccacc
acgcacaagacgctgcgcggtccgcgcggcggcatgatcctgaccgacgacgaagccatc
gcgaagaagatcaactcggcggtgttccccggccttcagggcggaccactgatgcacgtc
atcgccgccaaggctgtcgctttcggcgaagcgttgcagccggagttcaagacctacgcg
cgggccatcgtcaccaatgccaaagcgctggccggcaagctggagcagcgcgggctggcg
gtcgtttcgggcggcacggacacgcatctggcgctgatcgaccttcgcccctacggcatt
tcgggcaaggacgcggacgaggcgctggagcgcagcttcatcacctgcaacaagaatggc
gtgccgggcgatcccctgccgccgaccaagaccagcggcatccgcgtgggctccccggcg
ggcacgacgcgcggcttcggcgtggcggagttcgaggccattggcgacatgatcgcggac
gtgctgcaagggctgcgcgacaagggcgaggccggcgatccggcggtcgaggccaatgtt
cgcgagcgggtatcggcgcttacggcacgctttccgatctacgaaggataa
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