Sphingobium cloacae: SCLO_1007550
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Entry
SCLO_1007550 CDS
T05301
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo03420
Nucleotide excision repair
sclo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCLO_1007550
03430 Mismatch repair
SCLO_1007550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclo03400
]
SCLO_1007550
Enzymes [BR:
sclo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCLO_1007550
DNA repair and recombination proteins [BR:
sclo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCLO_1007550
MMR (mismatch excision repair)
Other MMR factors
SCLO_1007550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAV63795
UniProt:
A0A1E1EZW5
LinkDB
All DBs
Position
SCLO_1:884150..886426
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AA seq
758 aa
AA seq
DB search
MTTVAPSPSDPPYLLGLNAPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRAY
PSEILAVTFTNKAAREMRERVGRMIGPAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLGGLIDQWKNKGLTPEEIGAGESEAYAHGRG
QKLYAAYQARLREVNACDFGDLLLHVLTILKRHRDVLENYQQRFRYIMVDEYQDTNSSQY
LWLRLLAQNRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIVRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDAGEKVRVIGVWDGPEEARRVGDEIEGIERGGGSLDEV
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGDKAVEKLHRLARAEGIPLALAAARILDTDELTPQARRSLGAFIGDLARWRD
RAAQLPHAELARQILDESGYTAMLQADRTAESAGRLENLSELARAMEEYETLGAFLEHVS
LVMDNDAQAEERKVTIMTIHAAKGLEFDTVFLAGWEEGIFPSQRALDEGGLSALEEERRL
AYVALTRARKACIVLHAANRRIYGQWTSSIPSRFVGELPPEHVEEESSMAGGASLWRANW
SERADPFADVGRGTGRGPGWQRAQQNGQFSREPVRIVEARASAVSLGNKGRGDMMVGLRV
FHQKFGYGTVAEIEGNKLEIDFETAGRKRVMDSFVHPA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgtcgcgccctccccttccgatccgccctatcttctgggcctgaacgccccc
cagcgggaggccgtgctgacgacggaagggccggtcctcgtcctcgccggcgcgggcacg
gggaagacggcggcgctgacggcacggctcgcccatctcatcgccacgcggcgggcctat
ccttcggaaatcctcgccgtcaccttcaccaacaaggcggcgcgggaaatgcgcgagcgc
gtcgggcgcatgatcggcccggcggtcgaagggatgccatggctcggcaccttccacgcc
atcgccgcgaagatgctgcgccgccatgcggaactggtgggcctgcaatccaatttcacc
atcctcgacaccgacgaccagcttcgcctgatgaagcagctcatccaggcggagggcatc
gacgaaaagcgatggcccgcgcgccagttgggcggcctgatcgaccagtggaagaacaag
ggcctgacgcccgaggagatcggcgcgggggaaagcgaagcctatgcgcatgggcgcggg
caaaagctctacgccgcctatcaggcccgattgcgcgaggtgaacgcctgcgacttcggc
gacctgctgctgcacgtgctgacgatcctcaagcggcatcgcgacgtgctggaaaactat
cagcagcgtttccgctatatcatggtggacgaatatcaggacaccaacagcagccagtat
ctctggctccgcctgctggcccagaaccgcaagaacatctgctgcgtgggcgatgacgac
cagtccatttattcatggcgcggggcggaggtcgccaatatcctgcgcttcgaaaaggat
tttccgggcgcgaagatcgtgcggctggaacagaattaccgatcgacgccgcatatcctg
ggcgcggcttccggcgtgatcgcggagaatggcaaccggctcggcaagacgctctggacc
gacatcgacgcgggcgagaaggtccgcgtcatcggcgtgtgggacgggccggaggaagca
cgccgggtcggggacgagatcgaggggatcgaacgcggcggcgggtcgctggacgaggtg
gccatcctcgtgcgcgcgcagcaccagacccgcgagttcgaggaccgcttcatccagatc
ggcctgccctatcgcatcgtcggcggtttccgcttctatgagcgcgccgaaatccgcgat
gcgctggcctatctgcggctggtgaaccagcccgccgacgacctggcgttcgagcggatc
gtcaacgtgcccaagcgcggccttggcgacaaggccgtcgaaaagctgcatcgactggcg
cgggcggagggcattcccctggcgctcgccgccgcgcgcatattggataccgacgaactg
acgccgcaggcgcggcggtcgctgggcgcgttcatcggcgacctggcgcgctggcgcgac
cgggcggcgcaattgccccatgccgaactggcccggcagatcctcgacgaaagcggctat
accgccatgcttcaggcggatcgcacggcggaaagcgcggggcggctggagaacctcagc
gaactcgcccgcgccatggaggaatatgagacgctgggcgcgttcctggagcatgtcagc
ctcgtcatggacaatgacgcgcaggcggaggagcgcaaggtcacgatcatgaccatccac
gccgccaaggggctggaattcgacacggtgttcctggccggttgggaggaagggattttc
ccgtcgcaacgcgccctcgacgaaggggggctgagcgcgctggaggaagaacggcggctg
gcctatgtggcgctcacgcgggcgcgcaaggcctgcatcgtcctccacgccgcgaaccgc
cgcatctatggccagtggaccagttccatcccctcgcgctttgtcggcgagcttccgccc
gaacatgtggaggaggaaagcagcatggcgggcggcgcgtccctctggcgggccaactgg
tcggagcgggccgaccccttcgccgatgtggggcgcggcacgggccgcggccccggctgg
cagcgcgcacagcagaacggccagttcagccgcgagccggtgaggatcgtcgaagcacgc
gcttccgccgtttcgctggggaacaaaggacggggcgacatgatggtggggctgcgcgtc
ttccaccagaaattcggctatggcaccgtagcggagatagagggcaacaagctggagatc
gacttcgaaacggccgggcgcaagcgggtgatggacagtttcgtccatccggcatga
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