Sphingobium cloacae: SCLO_1012600
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Entry
SCLO_1012600 CDS
T05301
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo00071
Fatty acid degradation
sclo00280
Valine, leucine and isoleucine degradation
sclo00310
Lysine degradation
sclo00362
Benzoate degradation
sclo00380
Tryptophan metabolism
sclo00410
beta-Alanine metabolism
sclo00640
Propanoate metabolism
sclo00650
Butanoate metabolism
sclo00907
Pinene, camphor and geraniol degradation
sclo00930
Caprolactam degradation
sclo01100
Metabolic pathways
sclo01110
Biosynthesis of secondary metabolites
sclo01120
Microbial metabolism in diverse environments
sclo01200
Carbon metabolism
sclo01212
Fatty acid metabolism
Module
sclo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SCLO_1012600
00650 Butanoate metabolism
SCLO_1012600
09103 Lipid metabolism
00071 Fatty acid degradation
SCLO_1012600
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SCLO_1012600
00310 Lysine degradation
SCLO_1012600
00380 Tryptophan metabolism
SCLO_1012600
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SCLO_1012600
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SCLO_1012600
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SCLO_1012600
00930 Caprolactam degradation
SCLO_1012600
Enzymes [BR:
sclo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SCLO_1012600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SCLO_1012600
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SCLO_1012600
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
F420_oxidored
2-Hacid_dh_C
DAO
Pyr_redox_2
AlaDh_PNT_C
Sacchrp_dh_NADP
LSDAT_euk
NAD_binding_8
XdhC_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
BAV64300
UniProt:
A0A1E1F1C7
LinkDB
All DBs
Position
SCLO_1:1447511..1449688
Genome browser
AA seq
725 aa
AA seq
DB search
MNTIRFDIDGDGIATLTIDVPGQSMNVIGPDFIADLDAAITRIASEEGIKGAVIASGKDS
GFMAGMDLKYFGSMLASAEGQRPSPAAIFDNVFTLNQLFRRLETCGKPVACAIEGTCVGG
GFELALACHRRVVGDSSKTQLGLPEVLIGLFPGGGGSQRLPRLMGVQAALLYMLQGKLFR
PAEAAMLKVVDEVVPQGTAIEKAREWVKANPTASVQPWDVKGFKFPGGAGGFNPAFVQTM
AGAVPMTVKQTQRNMNAPIALLSAVYEGAILPIDQAIRVESKYFARVAADPQAGNMVRSL
FVNKQAAERGARRPKDQPKAPTKKLAMLGAGMMGAGIATVAAQAGMEVVLFDRDLAYAEK
GKAHVEEQLKKRLGKGMTPEKMAETLARVTPTTDYAALAGADFVIEAVFEDVAIKAEVTK
KVEEVLGADTIFGSNTSTLPITKLAKAWSKPENFIGIHFFSPVEKMPLVEIILGKETGPA
AIAKALDFVAQIKKTPIVVNDSRGFYTSRCFGTYVQEGVEMVAEGINPALIENGGRQLGM
PVGPLAVGDEVSIELGNKIVLAAKKELGDAYVAQRSDELMAQMVEMGRLGRKSAKGWYDY
PEGGKKHLWPGLAELFPLAADQPGVEAVKERLLYRQLIECARCFEEGVLETPEDGDIGAI
FGWGFAPWTGGPFSHMDTVGIAHVVAVLDRLAAAHGDRFAPTKQLREMAASGATFYRPAP
SRAAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatccgcttcgacattgacggcgacggtatcgccacgctgaccatcgacgtg
ccggggcagtcgatgaacgtcatcggccccgacttcatcgccgatctggatgcggcgatc
acgcgcatcgcttcggaagaagggatcaagggcgcggtgatcgcttcgggcaaggacagc
ggcttcatggcgggcatggacctcaaatatttcgggtccatgctggcgagcgcggaaggg
cagcgcccctcccccgccgccattttcgacaatgtgttcacgctgaaccaacttttccgg
cggctggaaacctgcggcaagccggtggcctgcgccatcgagggcacctgcgtgggcggc
ggtttcgaactggcgctggcctgccaccggcgcgtggtcggggacagcagcaaaacgcaa
ctgggcctgcccgaagtgctgatcgggcttttccccggtggcggcgggtcgcagcgtctg
ccgcgcctgatgggcgtgcaggcggcgctcttgtatatgcttcagggcaagctgttccgg
cccgcggaagccgcgatgctgaaggtcgtcgatgaagtggtgccgcagggcacggcaatc
gagaaggcgcgggagtgggtgaaggcgaacccgaccgcttcggtccagccctgggacgtg
aagggcttcaaattccccggcggcgcgggcgggttcaaccccgctttcgtgcagaccatg
gcgggtgctgtgccgatgacggtcaagcagacgcagcgcaacatgaatgcgcccatcgcc
ctgctgtcggcggtctatgaaggcgcgatcctgccgatcgaccaggcgatcagggtcgag
agcaaatatttcgccagggtcgccgccgatccgcaggcgggcaacatggtccgcagcctg
ttcgtcaacaaacaggcggccgagcgcggggcgcggcgtccgaaggatcagcccaaggcg
ccgacgaagaagctcgccatgctgggcgcgggaatgatgggcgcggggatcgcgaccgtc
gcggcgcaggcggggatggaggtcgtgctgttcgaccgcgacctcgcttatgccgagaag
ggcaaggcccatgttgaggagcagcttaaaaagcggctgggcaagggcatgacgccggag
aaaatggcggagacgctggcgcgggtgacgccgacgaccgattatgcggcgctggccggg
gcggacttcgtgatcgaggcggtgttcgaggatgtcgcgatcaaggcggaggtgaccaag
aaggtcgaggaagtgctgggcgcggatacgatcttcgggtccaatacttcgaccttgccg
atcaccaagctcgccaaggcatggagcaagccggagaatttcatcggcatccacttcttc
tcgccggtcgagaagatgccgctggtggagattatcctcggcaaggaaaccgggcctgcc
gccatcgccaaggcgctggatttcgtggcgcagatcaagaagacgcccatcgtcgtcaat
gattcgcgggggttctatacgtcgcgatgcttcggcacctatgtgcaggagggcgtggag
atggtcgcggaagggatcaacccggcgctgatcgagaatggcgggcggcaattggggatg
cccgtggggccgctggccgtgggcgatgaagtgtccatcgaactgggcaacaagatcgtg
ctcgccgcgaagaaggaactgggcgacgcctatgtcgcgcagcgatccgacgaactgatg
gcgcagatggtcgagatgggccgtctggggcgcaagagcgccaaggggtggtatgactat
cccgaaggcggcaagaagcatctttggccggggctggcggaactgttcccgctggccgcc
gatcagcccggcgtggaagcggtgaaggagcggctgctctatcggcagttgatcgaatgc
gcgcgctgcttcgaagagggcgtgctggagacgccggaggatggcgacatcggcgcgatc
ttcggatggggcttcgcgccctggaccggcgggccgttcagccatatggacacggtcggc
atcgcgcatgtcgtggcggtgctggaccggctggcggcggcccatggcgaccgctttgcc
cccacgaagcagttgcgggagatggcggcgagcggcgcgaccttctaccgccccgcccca
tcccgcgctgcggcataa
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