Sphingobium cloacae: SCLO_1015230
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Entry
SCLO_1015230 CDS
T05301
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCLO_1015230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclo03021
]
SCLO_1015230
03400 DNA repair and recombination proteins [BR:
sclo03400
]
SCLO_1015230
Enzymes [BR:
sclo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCLO_1015230
Transcription machinery [BR:
sclo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCLO_1015230
DNA repair and recombination proteins [BR:
sclo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCLO_1015230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
BAV64563
UniProt:
A0A1E1F226
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All DBs
Position
SCLO_1:complement(1759966..1761027)
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AA seq
353 aa
AA seq
DB search
MTVNMKNWQELKKPNALEIKTSGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGDGPKRLQLSATGPAEVKAGDI
AVVGDIEVMNPDLVICHLDQGATLNMELTADVGKGYVPAVANRPADAPIGLIPVDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTLETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
AAAPAAGSAASSSGEGESDANQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacgcgctggagatcaag
acctccggtgacggcaagcgcaaggcgaccttcgtcgccgaaccgctggagcgcggcttc
ggtctgacgctcggcaacgcgctgcggcgggttcttctctcctcgctccagggcgcggcg
gtcacttcgatcaagatcgagaatgtcctgcacgaattttcctcgctcgcgggcgtgcgc
gaagacgtgacggacatcgtcctgaacgtgaagcagatcgcgctgaagatggaaggcgac
ggtcccaagcggctccagctttccgccaccggcccggccgaagtgaaggcgggcgacatc
gcggtcgtgggcgacatcgaagtgatgaaccccgatctggtgatctgccatctcgatcag
ggcgcgacgctgaacatggaactgaccgccgacgtcggcaagggctatgtccccgccgtc
gccaaccgcccggccgatgcaccgatcggcctgatcccggtcgacgcgctctattcgccc
gtccgccaggtcgcctacaaggtggacaacacccgcgtcggccaggaactggactatgac
aagctgtcgctgacgctcgaaaccgacggcacggtgacgcccgaggacgcggtggcctat
gccgcccgcatccttcaggaccagctccagctcttcgtccatttcgaggacgcgctgccc
gccgccgctccggctgccggctctgccgcttcctcgtcgggcgagggcgaaagcgacgcg
aaccagatcaaccgctacctcctcaagaaggtggacgaactggaactgtcggtccgctcg
gccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagaccgag
gccgagatgctgcgcacccccaatttcggccgcaagtcgctgaacgagatcaaggaagtg
ctgtcgtccatgggcctgcgcctgggcatggacatccccggctggccgccggaaaatatc
gaggaaatggccaagaagctcgaacaggagctgctgggctga
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