Sphingobium cloacae: SCLO_1017020
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Entry
SCLO_1017020 CDS
T05301
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclo03032
]
SCLO_1017020
03400 DNA repair and recombination proteins [BR:
sclo03400
]
SCLO_1017020
Enzymes [BR:
sclo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCLO_1017020
DNA replication proteins [BR:
sclo03032
]
Prokaryotic type
DNA Topoisomerases
SCLO_1017020
DNA repair and recombination proteins [BR:
sclo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCLO_1017020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAV64742
UniProt:
A0A1E1F2R3
LinkDB
All DBs
Position
SCLO_1:1950300..1951310
Genome browser
AA seq
336 aa
AA seq
DB search
MPGQAIIHSDDSQPGITRRRLKRGWAYYDADGIRIADRDEIDRLNAIAMPPAYADCWFCP
SPNGHIQATGQDARGRKQYRYHPDFRAEREAEKYAGCLAFGLALPRLRARLDADLSGRGL
RKERTIAAVVRLLDLAKLRIGNEHYATTNKSFGATTLRRRHVDMAGHSLRLRYRSKSGLL
REMTVTDRRLARFVRKLHDLPGQHLFQYVDEAGEARPITSSDVNAYIAETMGGAFTAKHF
RTWGASTIAFAALCEGPVSLKQMIAPVAEALGNTPAISRKSYIHPALVDLCRNGQETWRE
GLRLPRRTRYLSRHERGLIALLDMRTEEEEKLPAAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacaagccatcatccattccgacgacagccagccgggcatcacgcgacgcagg
ctcaagcggggctgggcctattatgatgcggacgggatccgcatcgccgaccgggacgag
atcgaccggctgaacgccatcgccatgccgccagcctatgccgattgctggttctgcccc
tcgcccaacggccatatccaggcgaccggacaggatgcccgcggccgcaagcaatatcgc
tatcatcccgatttccgggcggagcgcgaagcggagaaatatgccggatgccttgccttc
ggcctggccctgccccgattgcgcgcccggctggacgccgatctttccggccggggactg
cgcaaggaaaggaccatcgcggcggtcgtgcgcctgctcgacctcgccaagctgcgcatc
ggaaacgagcattacgccaccaccaacaagagcttcggcgcgaccaccctgcgccggcgc
catgtggacatggcgggccattcgctgcggctgcgctaccgctccaaatcgggcctgctc
cgggagatgacggtcacggaccggaggctggcacgcttcgtgcgcaagctgcacgacctg
ccgggccagcatctgttccaatatgtcgatgaagcgggcgaggcccggccgatcacctcc
agcgacgtcaacgcctatatcgccgaaacgatgggcggcgccttcaccgccaagcatttc
cgcacatggggcgcctccaccatcgccttcgccgcgctgtgcgaagggccggtgtcgctc
aagcagatgatcgcgccggtcgccgaagcgctgggcaatacgcccgccatcagccggaaa
agctatatccatccggcactggtcgatctgtgcagaaatgggcaggaaacgtggcgagag
gggcttcgcttgccgcgccggacacgctatctctcccggcatgagcgcggactgatcgcg
ctgttggatatgcggacggaggaggaggagaagctgcctgcggccgcttga
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