Sphingobium cloacae: SCLO_1019580
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Entry
SCLO_1019580 CDS
T05301
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclo03000
]
SCLO_1019580
Transcription factors [BR:
sclo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SCLO_1019580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BAV64998
UniProt:
A0A1E1F3A1
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All DBs
Position
SCLO_1:2229280..2230158
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AA seq
292 aa
AA seq
DB search
MRRLPPLTALEAFVQVARLGSVKAAAEELALSTPALSRRVQALERFIGRPLFDRKHQALE
MNADGQRLLDDIAPALDSLSQALENIQSGGNQLRLRLAVMPLFATQRLFPRLGELRQMHP
QLHIDIETTPYAVARLGEGLDAAIVLAKDIDPALYAHELDHDEVYLIGRKALLEPPHALS
APEELSQHTILLHRDMALAFDAWKEAVGLPDLQPLAIDNYDSGQLMLEAAAQGLGVAVMH
ASHFQQAADGRLVRLFPVRVESPYRYFFVCRPRALQTRAVRIFRDWLVSADI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagactgccgcctcttacggccctggaggccttcgttcaggtcgcccgcctcggc
tcggtcaaggcggcggcggaggaactcgcgctgtccaccccggccttgagccgccgggtg
caggcgctggaacgcttcatcggccgcccgctgttcgaccgcaagcaccaggcgctggag
atgaacgcggacggccagcggctgctggacgacatcgcgcccgcgctggattcgctcagc
caggcgctggagaatatccagagcggcggcaaccagttgcgcctgcgcctggcggtcatg
ccgctgttcgcgacccagcggctgttcccgcggctgggcgaactgcgccagatgcacccg
cagcttcatatcgacatcgagaccacgccctatgccgtggcgcggctgggcgaagggctg
gacgcggccatcgtgctggcgaaggacatcgacccggcgctctacgcgcatgaactggat
catgacgaggtctacctgatcgggcgcaaggcgctgctggaaccgccccatgcgctcagc
gcgccggaggaactgtcgcagcacacgatattgctgcaccgcgacatggcgctggcgttc
gacgcatggaaggaagcggtcggcctgccggacctgcaaccgctggcgatcgacaattat
gattcgggccagttgatgctggaggccgccgcgcaggggctgggcgtcgccgtgatgcac
gccagccatttccagcaggcggcggacggccggctggtccgcctgttcccggtcagggtg
gaaagcccctatcgctatttcttcgtctgccgtccccgcgcattgcagacgcgcgcggtc
cgcatcttccgcgactggctggtttccgccgacatctga
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