KEGG   Sphingobium cloacae: SCLO_1019960
Entry
SCLO_1019960      CDS       T05301                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sclo  Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sclo03016]
    SCLO_1019960
Enzymes [BR:sclo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SCLO_1019960
Transfer RNA biogenesis [BR:sclo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SCLO_1019960
SSDB
Motif
Pfam: DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: BAV65036
UniProt: A0A1E1F3D8
LinkDB
Position
SCLO_1:2265477..2265944
AA seq 155 aa
MRFNPGSTYAAPNLKAVLADPERLKLYHFGRFDIAAIQHYLGVTAAPAYCTKIASRLVRT
YTDRHGLKELVRELLGQEISKQQQSSDWGAPVLSDAQKDYAASDVRYLHLLKEELDKRLI
REGRMELAQACFDFLPHRAQLDLAGWPEIDIFAHM
NT seq 468 nt   +upstreamnt  +downstreamnt
gtgcgcttcaaccccggcagcacctatgcggcgccgaacctgaaagccgtcttggcggac
ccggaacggctgaaactctatcatttcgggcgtttcgacatcgccgcgatccagcattat
ctgggcgttaccgccgcgcccgcctattgcaccaagatcgcttcgcggctggtgcggacc
tataccgaccggcatggtctcaaggaactggtgcgcgaattgctggggcaggagatcagc
aagcaacagcaaagctccgactggggggcgcccgtcctgtccgacgcgcagaaggattat
gccgcgtccgacgtgcgctatctgcacctgctgaaagaggaactggacaagcggctgatc
cgcgaaggacggatggaactggcgcaggcctgtttcgattttctccctcaccgggcgcag
ctggacctggccgggtggccggagatcgacatcttcgcccatatgtaa

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