KEGG   Sphingobium cloacae: SCLO_1021920
Entry
SCLO_1021920      CDS       T05301                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sclo  Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sclo03400]
    SCLO_1021920
Enzymes [BR:sclo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SCLO_1021920
    5.6.2.6  RNA 3'-5' helicase
     SCLO_1021920
DNA repair and recombination proteins [BR:sclo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SCLO_1021920
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: BAV65232
UniProt: A0A1E1F448
LinkDB
Position
SCLO_1:2480844..2483255
AA seq 803 aa
MDIALPDPLERWFADRGWTPRRHQRDMLAAARRGEHALLVAPTGAGKTLAGFLPTLADLI
ERPGEGLHTLYISPLKALAVDVRRNLLTPIEEMDLPIRVETRTGDTPSDRKARQRARPPQ
ILLTTPESLSLLLSYPDSFLMFSGLKTVIVDEVHAFATQKRGDLLNLSLARLQAIHPGLR
RVALSATVADVDAYRAWLAPDGDIDTVTPVLGEQGAEPNVAILIPEGRIPWSGHSGKYAA
RQVMEEIERRQTTLVFCNTRGLAELIFQSLWAVNDANLPIAIHHGSLSIEARRKVESAMA
AGKLRGLVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRANHRLDMPSEAILIPGN
RFEYLEARAALDAVESGERDTDDFRPGSLDVLAQHVMAMACAAPFREEALLAEVRSAMPY
SALTDEAFANVLHFIEGGGYALRAYDRFKRLTRDPDGTWRVSHPRFIQQHRMNAGIIVDQ
PVLDVRFANGRKLGTVEEGFAATLRPGDSFFFSGMALEVVRMDLTDLIVRATAKQARLPS
WGGTRMAMSTRLADRVRHFLAAPEEWHRFPEDVREWLAMQKYRSALPQPGQLLVETFPHE
GRHYLVCYSFEGWNAHQSLGMLLTRRMDAQGLMPLGFVSNDYALAVYGLKPVTDPQSLFS
ADILDHEFVEWVEESSLLKRAFRDVAVISGLIERQHPGKRKTGRQVTFSTDLIYDVLRKY
QPDHLLLKAAWADARARMTDVGRLGDLIDRAASTMLHVDLDRVSPLAVPVLILIGREQVA
QAAAEDALLIEAEALVAEAMRAD
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggacatagcccttcccgatccgctggagcgatggttcgcggatcgcggctggacgccc
cgccgccatcagcgcgacatgctggccgccgcgcgccggggcgaacatgcgctgctggtc
gcgcctacgggggcgggcaagacgctggcggggttcctgccgacgctcgccgacctgatc
gaacgaccgggggaggggcttcacaccctctatatctcgccgctgaaggcgctggcggtg
gacgtccgccgcaacctcctcacccccattgaggagatggaccttcccatccgcgtcgag
acgcgcaccggcgatacgccctcggatcgcaaggcccgacagcgcgcccggcccccgcag
atattgctgaccacgcccgaatcgctttcgctgctgctgagctatcccgacagcttcctg
atgttttccgggctgaagacggtcatcgtcgatgaagtccacgccttcgcgacgcagaag
cgcggcgatctgctcaacctgtcgctggcgcgcttgcaggcgatccatccgggcctgcgc
cgcgtggcgctgtccgccacggtggcggatgtggacgcctatcgcgcctggctcgcgccc
gatggcgacatcgacacggtgacaccggtgctgggcgagcagggcgcggagccgaatgtc
gcgatcctcatccccgaagggcgcatcccctggtccggccactccggcaaatatgccgcc
cggcaggtaatggaggagatcgagcggcggcagaccacactcgttttctgcaacacgcgg
gggctggcggagctgatcttccagtcgctctgggcggtgaacgacgccaacctgcccatc
gcgatccaccatggcagcctgtccatcgaggcgcggcgcaaggtggaaagcgccatggcg
gcggggaagctgcgcggccttgtcgcgaccgccagcctcgacctgggcgtcgattggggc
aatgtcgattgcgtgatccagatgggggcgcccaagggttcgtcccgcctgctccagcgc
atcggccgcgccaatcaccggctcgacatgcccagcgaggcgatcctgatccccggcaac
cgcttcgaatatctggaggcccgcgccgcgctcgacgccgtggaatcgggcgagcgcgat
acggacgatttccggcccggcagcctcgacgtgctggcccagcatgtgatggcgatggcc
tgcgccgcgcccttccgcgaggaggcgttgctggccgaagtccgctccgccatgccctac
agcgcgctgacggacgaagccttcgccaacgtcctgcatttcatcgagggtggcggctat
gccctgcgcgcctatgaccgcttcaagcgcctgacccgcgatccggacggcacatggcgc
gtatcccatccccggttcatccagcagcacaggatgaacgcgggcatcatcgtcgaccag
ccggtgctggacgtgcgcttcgccaatgggcgcaagcttggcacggtggaggagggcttc
gccgccacgctgcgaccgggcgacagcttcttcttttccggcatggcgctggaagtggtg
cggatggacctgaccgacctcatcgtgcgcgcgacggccaagcaggcgcggctgccaagc
tggggcggcacgcgcatggccatgtccacgcggcttgccgaccgggtgcgccacttcctc
gccgcgccggaggaatggcaccgcttccccgaggatgtgcgcgaatggctggcgatgcag
aaataccggtccgcgctgccgcagccggggcagctcctggtcgaaaccttcccgcatgag
gggcggcattatctggtctgctacagtttcgaagggtggaacgcgcatcagtcgctgggg
atgctgctcacccggcgcatggacgcgcaggggttaatgccgctgggcttcgtgtcgaac
gactatgcgctggcggtctatgggttgaaacccgtcaccgatccgcagagcctcttttcc
gccgacatccttgaccatgagttcgtggaatgggtggaagaatcgagcctgctcaagcgc
gcctttcgcgacgtggcggtgatttccggcctgatcgagcggcagcatcccggcaagcgc
aagaccgggcggcaggtgaccttctccaccgacctcatctatgacgtgctgcgcaaatat
cagcccgaccatctgctgctgaaagccgcatgggccgacgcccgcgcgcggatgacggat
gtggggcgtctgggcgacctcatagaccgggcggcttccaccatgctgcatgtcgatctg
gatcgcgtcagcccgctggcggttccggtgctgatcctcatcgggcgcgagcaggtggcg
caggccgcggcggaggacgcccttctgatcgaggcggaggcgctggtggccgaggcgatg
cgggcggattag

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