Sphingobium cloacae: SCLO_1023440
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Entry
SCLO_1023440 CDS
T05301
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sclo01011
]
SCLO_1023440
Enzymes [BR:
sclo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SCLO_1023440
Peptidoglycan biosynthesis and degradation proteins [BR:
sclo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SCLO_1023440
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GFIT
Motif
Pfam:
SLT
HEAT_Nup120
TPR_16
Motif
Other DBs
NCBI-ProteinID:
BAV65384
UniProt:
A0A1E1F4D5
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All DBs
Position
SCLO_1:2664046..2665941
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AA seq
631 aa
AA seq
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MSGRIGVSQDASINGAISQWRALQQSDGLGSSTYMSFIMANPGWPGEDRMRRLAETGINP
DSYDPRQVSAFFARFPARTAVGHARNALALMQLGRMDEARVAARNAWTGGSLSPTDEARL
LQLFGSGFSAADHDQRADILLWGNDVPGAMRMLAYVPPARRPVYEARIAFRQKAPDATLK
MQAAEALGATDAGFVADKAMWLRNTGNWIGARQYLANRPTLAFRPGNAEKFYETLLDQAR
ASANDKQWSFAWGIASRIDDAYAPGTDVSTRPIGERDDYTSLAWLAGTTAFYNLNRPSDA
VTMFRRYAAAAKSPQTQSKGYYWAGRAALGAGDAASANSYFQQAAVFPDQFYGQLALERL
GRPIPAPTVHEQAVEIAAADRAAFNNRSVVRAVRALGAMGYWEDQSKFARAIANNADSDS
DHYLAAELAKSIGRTDMSVMVGRRAVSSGLTGYGESAFPRVPVPPSAQSHWTMVHAIARQ
ESQFDRAAVSHAGARGLMQLMPGTAREQAGKLGMGYNPGSLTTDTSYNIMLGSSYFERML
NYYGGSYPLAVAAYNAGPGNVNKWIAANGDPRMPGGDWLRWIESIPIFETRNYVQRVLEN
AVVYEAMNPDRARFRGTNAVLSRYLGKQTPG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcggatcggcgtttcccaggacgcctcgatcaatggcgcgatcagccagtgg
cgcgccttgcagcagagcgacggcctgggttcctccacctatatgagcttcatcatggcc
aatcccggctggccgggcgaggaccggatgcggcggctggcggaaaccgggatcaatccc
gacagctacgatccgcggcaggtctcggccttcttcgcccgcttcccggcgcgcacggcg
gtgggccatgcccgcaacgcgctggcgctgatgcagctggggcggatggacgaggcgcgc
gtcgcggcgcgcaatgcgtggaccggcggatcgctgtcgcccaccgacgaggcgcggctt
ctccagcttttcggatcgggtttcagcgccgccgatcacgaccagcgcgccgacatcttg
ctgtggggcaatgacgtgccgggggcgatgcggatgctggcctatgtgccgccagcccgc
cgcccggtctatgaagcgcggatcgccttccgccagaaagcgcccgacgccacgctgaag
atgcaggccgccgaagcgctgggcgcgaccgatgcgggtttcgtcgcggacaaggcgatg
tggctgcgcaacaccggcaactggatcggggcgcggcaatatctggccaaccggccgacg
ctcgccttccggcccggcaatgccgagaaattctatgagacgctgctggatcaggcgcgc
gcttcggcgaacgacaagcaatggagcttcgcctggggcatcgccagcaggatcgacgat
gcctatgcgccgggcaccgatgtcagcacccggccgatcggcgagcgcgacgattatacc
agccttgcctggctggcgggaacgacggccttctacaatctcaaccggccctccgacgcg
gtgaccatgttccgccgctacgccgccgccgccaaatcgccgcaaacgcagtccaagggc
tattattgggcgggacgcgccgcgctcggcgccggggacgcggcatcggccaacagctat
ttccagcaggcggcggtcttcccggatcagttctacggacagcttgcgctggagcggctg
ggccgtcccatccccgcccccaccgtccatgaacaggcggtggagatcgccgccgccgac
cgggcggcgttcaacaaccgctccgtggtccgcgccgtccgggctctgggcgcgatgggc
tattgggaggaccagagcaagttcgcccgcgccatcgccaataatgccgacagcgacagc
gatcattatctggccgccgaactcgccaagagcatcggccgcaccgacatgagcgtgatg
gtcggccgccgcgccgtgtcgagcggcctcaccggctatggcgaaagcgcttttccccgg
gtgccggtgccgccttcggcgcagtcccactggacgatggtccacgccatcgcgcggcag
gaaagccagttcgaccgcgccgccgtcagccatgcgggcgcgcgcgggctgatgcagctg
atgcccggcaccgcgcgggagcaggcggggaagctgggaatgggttacaatcccggatcg
ctgaccaccgacaccagctataacatcatgctgggatcgtcctatttcgagcggatgctg
aactattatggcggcagctatccgctggcggtggcggcctataatgcggggcccggcaat
gtgaacaaatggatcgcggccaatggcgatccccggatgccgggcggcgactggctgcgc
tggatcgagagcatcccgatcttcgagacgcgcaactatgtgcagcgggtgttggaaaat
gccgtggtctatgaagcgatgaacccggaccgggcacgtttccggggcaccaatgcggtg
ctcagccgctatctggggaagcagacgccgggctga
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