Sphingobium cloacae: SCLO_1028660
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Entry
SCLO_1028660 CDS
T05301
Name
(GenBank) MiaB-like tRNA modifying protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclo03016
]
SCLO_1028660
Enzymes [BR:
sclo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SCLO_1028660
Transfer RNA biogenesis [BR:
sclo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SCLO_1028660
Prokaryotic type
Methylthiotransferases
SCLO_1028660
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
DUF3798
Motif
Other DBs
NCBI-ProteinID:
BAV65906
UniProt:
A0A1E1F5V7
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All DBs
Position
SCLO_1:complement(3292113..3293357)
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AA seq
414 aa
AA seq
DB search
MSGPEIITLGCRLNIAESEAIREMTAGQDDLVVINSCAVTAEAVRQARQAIRRARRERPD
ARIMVTGCAAQTEPATFSAMPEVDAVLGNREKMEARSYLSTAEPTVSDIMAVRDTAPHMA
SAFAEHARAFLEVQNGCDHRCTFCIIPYGRGNSRSVPAGAVIDKARQLVDAGYREIVLTG
VDVTSYGPDLPGSPSLGLLIERLLKGVPDLPRLRLSSLDSVEIDERLFDLIAHEPRLMPH
LHLSLQSGDDMILKRMKRRHARADAIRIVDRLKSARPDISIGADIIAGFPTEDEAMFDNS
LRLIAECRIVHGHIFPYSPRAGTPAARMPQVDRATIRDRAARLRDACAGERTRWLQSLIG
STQSVLVERNGISGHAENFAPVRFATAQPPSSIVRAVITGLEKGALIAQEAQDD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcctgagatcatcacgctgggttgccgcctcaacatcgcggagagcgaggcg
atccgggaaatgacggcggggcaggacgatcttgtcgtcatcaatagctgcgcggtgacg
gcggaagccgtgcggcaggcccggcaggcgatccggcgcgcgcggcgggagcggcccgat
gcgcggatcatggtgacgggatgcgcggcgcagaccgagcctgcgactttttccgcgatg
ccggaagtcgatgcggtgctgggcaatcgggagaagatggaggcgcgctcctatctctcc
acggcggagcccaccgtctccgacatcatggcggtgcgcgacaccgcgccgcatatggcg
agcgcctttgccgaacatgcgcgcgctttcctggaagtgcagaatggctgcgaccatcgt
tgcaccttctgcatcatcccctatggccgggggaacagccgatcggtcccggcgggcgcg
gtgatcgacaaggcgaggcaactggtggacgcgggctatcgcgagatcgtgctcaccggc
gtcgacgtcaccagctatggtcccgacctgccgggcagcccctcgctcggcctgctgatc
gagcgcctgttgaagggcgtgccggatttgccccgcctgcgcctctcctcgctcgacagc
gtggagatcgacgagcggctcttcgacctcatcgcccatgagccgcgcctgatgccgcat
ctgcacctgtcgctgcaatcgggcgacgacatgatattgaagcggatgaaacgccgccat
gcccgcgccgacgcgatccgcatcgtcgatcggctgaaaagcgcccgtccggacatcagc
atcggcgcggacatcatcgcgggtttcccgaccgaggacgaggcgatgttcgacaacagc
ctgcgcctgatcgcggagtgccggatcgtccacggccacatcttcccctattcgccgcgc
gcgggcacgcccgccgcgcggatgccgcaggtggaccgcgccacgatcagggaccgcgcc
gcccgcctgcgcgacgcctgcgccggggagcgcacgcgctggctgcaaagcctgatcggt
tccacccaatccgtgctggtggagcgcaacggcatcagcggccatgcggaaaatttcgcg
ccggtccgcttcgcaacggctcagcccccctcctccatcgtccgggccgtcatcacgggg
cttgagaagggcgcgctgatcgcgcaagaggcgcaggatgactga
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