Sphingobium cloacae: SCLO_1032210
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Entry
SCLO_1032210 CDS
T05301
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCLO_1032210
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sclo01007
]
SCLO_1032210
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclo03016
]
SCLO_1032210
Enzymes [BR:
sclo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SCLO_1032210
Amino acid related enzymes [BR:
sclo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SCLO_1032210
Transfer RNA biogenesis [BR:
sclo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SCLO_1032210
Prokaryotic type
SCLO_1032210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Knl1_RWD_C
TMF_TATA_bd
Spectrin
Motif
Other DBs
NCBI-ProteinID:
BAV66261
UniProt:
A0A1E1F776
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All DBs
Position
SCLO_1:complement(3692175..3693452)
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AA seq
425 aa
AA seq
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MHDIRFIRENPAAFDAALARRGLEPLSVGILALDERNRALKTELQHGQARRNEASKAIGQ
AMAARDMEKAESLKAEVAALKDRMPALEAEDRETGEQLLAMLAAIPNLPADDVPQGADEA
ANVEIGRWGEPRSFPFAPQDHADFGPALGLDFEGAAALSGARFAALRGQMARLHRALAQF
MLDRQSGENGYEEVNPPLLVRDDALFGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNLVR
EQIVAAESLPIRLTALTPCFRSEAGSAGRDTRGFIRQHQFEKVELVAICKPEDSEAEHER
MCAAAEGVLQALNLPYRKMLLCTGDMGFSARKTWDLEVWLPSQQTYREISSVSNCGDFQA
RRMNARYKPEGEKQTRFLHTLNGSGLAVGRALVAVLENYQQEDGSVVVPEALAPYMGGIT
RLRTN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatccgcttcatccgcgaaaaccccgccgccttcgacgccgctctggcccgg
cgcggcctcgaaccgctttcggtgggcatcctcgcgctcgacgaacgcaaccgcgccctc
aagacggagttgcagcacggccaggcccgccgcaacgaagcgagcaaggccatcggtcag
gccatggccgccagggacatggaaaaggccgagagcctgaaagccgaagtcgccgcgctc
aaggacaggatgcccgcgctggaggcggaggaccgcgagaccggcgaacagcttctggca
atgctggccgccatccccaacctccccgccgacgacgtgccgcagggcgcggacgaagcc
gccaatgtggaaatcggccgctggggcgagccgcgcagcttccccttcgcgccgcaggac
catgccgatttcggtcccgcgctcggtctggatttcgagggcgcggcggcgctgtcgggc
gcgcgcttcgccgccctgcgcggccagatggcgcggctccaccgcgcgctcgcccagttc
atgctcgaccggcaatcgggcgagaatggctatgaggaagtcaacccgcccctcctcgtc
cgcgacgatgcgctgttcggcaccggccagcttcccaaattcgccgaggacctgttccgc
accaccgacggccgctggctgatccccacagcggaagtcagcctcaccaatctggtgcgc
gaacagatcgtcgcggcggaaagcctgccgatccgcctcaccgcgctcaccccctgcttc
cggtccgaagccggatcggcgggccgcgacacgcgcggcttcatccgccagcaccagttc
gagaaggtggaactggtcgccatctgcaaacccgaagactccgaagccgaacatgaacgc
atgtgcgccgcggcggagggcgtgcttcaggcgctgaacctcccttatcgcaagatgctg
ctctgcaccggcgacatgggcttttccgcgcgcaagacctgggaccttgaagtctggctg
cccagccagcaaacctatcgcgagatcagctccgtctccaactgcggcgatttccaggcg
cggcgcatgaacgcccgctacaagccggaaggcgagaagcagacccgcttcctccacacc
ctgaacggctccgggctggcggtcggccgcgcgctggtcgcggtgctggaaaattatcag
caggaggacggcagcgtcgtcgtgccggaagcattggcgccttatatgggcgggatcacg
cggctgcggaccaactga
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