Sphingobium cloacae: SCLO_2001130
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Entry
SCLO_2001130 CDS
T05301
Name
(GenBank) FecI sigma-24 factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclo03021
]
SCLO_2001130
Transcription machinery [BR:
sclo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCLO_2001130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_30
HTH_1
HTH_28
HTH_10
HTH_24
GCP_N_terminal
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BAV66446
UniProt:
A0A1E1F7F2
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All DBs
Position
pSCLO_2:complement(123336..123908)
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AA seq
190 aa
AA seq
DB search
MSLDLAACTDGELAALTLGGRQAAFAEIMRRHQKPVYRLIRSHIGDAEEALDLTQECFVA
AFQNLRKYDGERPLAAWLTRVAINKSRDWHRRRRIRQILSFASSLPPETMESGRDEAPGA
DAVTFDRAELARLSRAVSELPATLKETLLLRTVEGLSQGETAAALGISGKAVEMRLRRAR
ERLSKNLDLV
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctcgatctcgcggcctgcacggacggcgaactcgccgccttgacgctcggcgga
cgtcaggctgcgttcgctgagatcatgcggcggcaccaaaaaccggtctaccgcctgatc
cgctcgcatatcggcgacgccgaagaggcgcttgacctcactcaggaatgcttcgtggcc
gcctttcagaacttgcgaaagtatgacggagagcgaccgctcgctgcgtggctgacccgc
gtggcgatcaacaagagccgcgactggcacaggcggcggcgcatacgccagatactatcg
ttcgcctcttcgctgccgcccgagaccatggagagtgggcgggacgaggcgccaggtgcc
gacgcggtaaccttcgatcgcgcagagcttgcgcggctttcgcgcgcggtgtccgagctg
ccggccacgctcaaggagacgcttttgctgcggaccgtggaaggactgtcccagggggag
accgcggccgcgctggggatcagcggcaaggccgtggagatgcgactccggcgcgcgcgt
gaaagattgtcgaaaaatctcgacttagtgtga
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