Sphingobium cloacae: SCLO_2001560
Help
Entry
SCLO_2001560 CDS
T05301
Name
(GenBank) DEAD/DEAH box helicase
Organism
sclo
Sphingobium cloacae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
DUF3638
CPP1-like
Motif
Other DBs
NCBI-ProteinID:
BAV66489
UniProt:
A0A1E1F7K1
LinkDB
All DBs
Position
pSCLO_2:169301..172825
Genome browser
AA seq
1174 aa
AA seq
DB search
MPTSPEAISAAITDAAATGFRGRLIARGQARAMIWREGVLPAGAPAFSAQLNFDLHSYGY
GLLGLGLRLLELGGDPAQARVAFEQAATALEAVMAKGNRAEADRDFHFVMAAASYHLAHL
SARAYSLLAVVAEEENFSLIEQALALLMRRDINELRARVYAFRLDGRGSDEAITALFQQR
LADPLAGDAAERDGHDFLFEGLDLALTDAFFGAVSMFLLALDRGERALIDRAIAQLRESL
AICAELNLLPQWWAHRVAIHLLSDLWSNTFHERVPLIPAGGEAPPWRGLRDLFIGLLARR
PRAEVDLWPSQIEAAARAVDQADNLVVSLPTSAGKTRVAELSILRCLAAGRRVMFVTPLR
ALSAQTETTLQRTFGPLGKTISALYGSIGVSAFDEDAIRERDIVVATPEKLDFALRNDPS
LLDDVGLLVFDEGHMIGPGEREVRYEVQIQRLLRRPDAEQRRIVCLSAILPDGPQLEDFS
AWLRRDQPGDPIKDDWRPTRLRFGEVVWSSPRARLNLRVGEEQPFVPGFLTGVAPPLFLP
PKKLRTRLFPDNQQELSLATAWRLVDDGQTVLIYCPERRSVEPFAKVIVDLHTRGALASL
LTVDPVRLQTAIALGEEWLGADSDILKCLRLGVALHHGALPTAYRKEVERLLRDGVLKVT
ISSPTLAQGLNLSATAVVMHSLYRHGEKIKVSEFKNVIGRAGRAYVDVEGLVLFPIFSDT
QNKKHDEWVGLIGDLGAREMESGLVQLIFALLKRMHARIGGNLEQLVDYVVNNAAAWTFP
EVAGEIPEKRERALKQWERSMATLDTAILSLIGEDDVPDDQIEAALDTVLQSSLWNRRLE
RLDAGSRAAYRATLLTRSRYIWANSTAVSRRGYFLAGLGLEAGHALDAVAPVANDLLVQA
NAALLVGDHEAAITAITGIAERVFSFYPFEPDPFPDNWRDILRCWLLGQPLASTVAGQEG
DALQFIEGGLVYRLPWAMEALRVRAAANGDVVGVFGLALADHELGLAVPAVETGTMNRST
SILIQAGFNSRLAAIKAVVDTGATFTSGAELRTWLRSPVLAAWSAQPDWPSPETRAMWLE
FVQEAAPAANRTWARRDYVGNVEWFAAPAPPGSPVSLHNWNGQPLVLSADGRGIGRLQHP
LNHNRRGLLRATVAPNPAELDLSYLGPDDLWAVA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccagccctgaggcgatctccgccgccatcaccgatgcagccgccaccggattt
cgcggtcgtctgatcgcgcgcggccaggcacgggcgatgatatggcgggagggcgtgctc
ccggcgggcgcaccggccttttctgcgcaactgaacttcgacctgcacagctacggttac
gggctgctcgggcttgggctgcgtcttcttgagctcggtggcgacccagcccaggcgcgt
gtcgccttcgagcaggccgcgaccgcccttgaggcggtcatggccaagggcaatcgcgcc
gaagccgaccgggactttcacttcgtgatggcggctgcgagctaccatctcgcgcatctc
tccgcccgtgcctactccctccttgcggtcgtggcggaggaggagaacttctcgctcatc
gagcaggcgctggcgcttctcatgcggcgggatatcaacgagctgcgtgcccgggtctat
gcctttcgcctcgatggtcggggatcggatgaggccatcaccgcgctcttccagcagcgt
cttgccgatccgcttgccggcgacgcggccgagcgggatggccacgatttcctgttcgag
ggcctcgacctcgctctaaccgatgccttcttcggtgccgtgtcgatgttcctgctcgcg
cttgaccgcggcgagcgcgctctgatcgaccgtgcgatcgcccaactgcgcgagagtctc
gccatttgcgctgagctgaacctcttgccgcaatggtgggcgcaccgcgtcgcgatccat
ctgctctccgacctatggtcgaacacgtttcatgagagggtgcctctcattccggctggt
ggggaggcgccgccgtggcggggcttgcgcgatctcttcatcggactgctcgcccgccgt
ccgagggcggaagtcgacttgtggccgtcacagatcgaggccgccgcgcgcgcggtcgat
caggctgacaatctcgtggtctcgctaccgacgagcgccgggaagacgagggtcgccgaa
ctctcgatccttcgctgcctggctgccgggcgccgcgtgatgttcgtcacgccacttcgt
gctctgtccgcgcagacggaaacgacgcttcagcgaacgttcggcccgctcggcaagacc
atatccgccctgtacggtagcatcggcgtctctgcgttcgacgaagatgcgatccgcgag
cgggacattgtcgtcgcaactccggagaaactcgacttcgccttaaggaacgatccgtca
ttgctcgacgatgtcggtctgctcgtcttcgacgagggccacatgatcggtccgggcgag
cgcgaagttcgctacgaggtccagatccagcgccttctccgccgaccagacgcggagcag
cgccggatcgtctgcctgtcggcaatcctgcccgatggcccgcagctcgaggatttctcg
gcatggttgcggcgtgatcagccaggcgatcccatcaaggacgactggcggccgacacgc
ctgcggtttggcgaggtggtctggtcatccccccgggcacgcctcaacctgagggtcggc
gaagagcagcccttcgtgcccgggttcctcaccggcgtagcaccgccgctcttcctaccg
ccgaagaagctgcggacccggctgtttcccgacaatcagcaggagctcagccttgccacc
gcctggcgtctggtcgacgatggacagaccgtcctgatctattgcccggagcggcgcagc
gtcgagccgttcgccaaggtcatcgtcgacctgcatacgcgaggcgcgcttgcgtcactg
ctcacggtcgatccggtgcggctgcagaccgcgatcgcgctcggtgaagaatggctgggc
gcggacagcgatatcctcaaatgcctccgcctgggcgtggccctccaccacggtgcgctt
ccgaccgcctatcgaaaagaggttgagaggcttctgcgagacggcgttctgaaggtgacg
atctcatcacccactctcgcgcaggggctcaacctctcggcgacggcggtcgtcatgcat
tcgctctatcggcatggcgagaagatcaaggtctccgagttcaagaacgtgatcggacgc
gccggccgggcctatgtcgacgtcgaaggcctggtgctcttcccgatcttcagcgacacc
cagaacaagaagcatgacgagtgggtgggcctgatcggggatctcggcgcccgcgagatg
gaaagcggcctcgttcagctcatctttgcgctcctgaagaggatgcatgcgcggatcggc
ggcaatctcgagcagctcgtcgactatgtggtcaacaacgccgcggcctggaccttcccc
gaagtggcgggcgagatccccgaaaagcgcgaacgagcgctcaagcaatgggagcgctcc
atggcgacgctcgatacggcgatcctcagcctgatcggcgaagacgatgttcccgatgac
cagatcgaagccgcgctcgacacggttcttcagtcctctctctggaaccggcgcctggag
cgcctcgatgccgggtcgcgcgccgcttaccgtgcgacgctcctcacccggagccgctac
atttgggccaattcgactgccgtctcgcgccgcggctattttcttgcggggctgggtctc
gaggcgggtcacgcgctcgacgcggtggcgccggtggccaacgaccttctggtgcaggcg
aacgctgcgctgctggttggagatcacgaggctgcgattacggcgatcaccggcatcgcc
gagcgggtcttctccttctatccgttcgagccggacccatttccggacaactggcgcgac
atccttcgttgctggctgctcgggcagccactcgcctccaccgtcgcggggcaggaaggc
gatgcgctgcagttcatcgagggcggcctcgtctatcgcctgccgtgggcgatggaggcg
cttcgtgtgcgtgcggccgccaacggtgatgtcgttggcgtcttcggcctggccctcgcc
gatcatgagctgggtctagcggtccctgccgttgagaccggcaccatgaaccgatcgact
tcgattctcatccaggcgggcttcaactcgcgtttggcagccatcaaggccgtcgtggac
accggcgcgactttcacgtcgggtgcggaattgcggacatggctgcgctcgcctgtcctc
gcggcctggtcggctcagccggactggccttctcccgagacgcgagcaatgtggctcgag
ttcgtccaggaagccgcgcctgcggcgaaccggacctgggcacgacgggactatgtgggg
aatgtcgagtggttcgcggcgccggctccgcccggctctcccgtgagcttgcacaactgg
aacggccagccgttggtgctctctgccgatgggcgcggcatcggccgcctccagcatccg
ctcaaccataatcggcgtggccttctccgcgcgacagtcgcgccgaaccctgcggagctc
gacctgagctatctcggacccgatgacctttgggctgtggcatag
DBGET
integrated database retrieval system
