KEGG   Sphingobium cloacae: SCLO_2001680
Entry
SCLO_2001680      CDS       T05301                                 
Name
(GenBank) type-IV secretion system protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
sclo  Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sclo02044]
    SCLO_2001680
Secretion system [BR:sclo02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   SCLO_2001680
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 DUF87 T4SS-DNA_transf TrwB_AAD_bind FtsK_SpoIIIE Fer4_NifH CbiA AAA_16 TraG-D_C AAA_22 nSTAND3 MeaB Mg_chelatase RNA_helicase
Other DBs
NCBI-ProteinID: BAV66501
UniProt: A0A1E1F7V8
LinkDB
Position
pSCLO_2:183990..186581
AA seq 863 aa
MSVKPRFYDNLLSGLFGDSKRPEAERPDLAVPMLAHWLPYRSYDPKTGIFYNSASRGFVI
EVSPLVGADERTGEILTQFLSEGIPVPGCLQFHDWMSPRISERLSKWYLPRYSASGVYER
MAKHRVDFLTDGVWNSLSADAPFCLRNHRVAISYSTPESSRVSAEEIVAVMDGLISVLGS
IGVSARKMDPVALIGWIDDITSPTTAAGDDVISYNPLDPIADQAVRRDIEMKVDPDRILL
RTERFRPTGKEVNGAPEIGEIYPDVFDVRSFSVRNLPQRWAPWDCARLIGDMFADKLRMP
CPVSTNLCLDFPDPQASSNKAGFKFMRTTSLADSKSARFLPQLRDQSQEWKFVNDEIRQG
RKLVRLFYSVTSFSPKGKGDANERVLKSVYRAAGWDLLDDRYLQVMGLLCAMPMTMANGL
SRDLERMKRMRTMLSTTAANLAPIQGEYLGGHTPHLLLIGRRGQPFFWSPFENAAGNHNV
AVFGKSGSGKSVALQELCASLCGAGSKVVVIDDGRSFEHSAKLQGGAFVEFTMSSGFCLN
PFSMIDAAQAAEDEDYLLDCMAMLKAIVNQMSRHIDRLTDTERGLIDGAVNRVWEAKGRN
GSIDDVIAALNETGNELASHLAIAMMPFSSAGTYGKFFQGEVSFELQAQLTVFELSDLSS
REELRSVVLTAIMFMSQQMMRKVDRSIPKALLLDEAWQMLRGGAMADFIETYARTCRKYG
ASLVTATQSLNDYYKSAGSIAALENSDWFVILQQKPETIADFKKHDRFEMDDYTDALLRS
LKRNGFEYSDIMIKGPETLAVGRLVLDPFSAALFSSSPRTFAAIEAMVAGGLSMDEAIER
IAFPENPEKWTMPAGDTAAIAAE
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgagcgtaaagccccgtttctacgacaacctgctctccggtctgttcggcgatagcaag
cgaccagaggccgagcgtccggacttggccgtgccgatgctcgcgcattggctgccctat
cgcagctacgacccgaagacgggcatcttctacaactccgcctcgcgcggattcgtgatc
gaggtctcgccgctcgtcggggcggatgagcgtaccggcgagatcctgacacaattcttg
tccgagggcatcccggtgcccggatgcctgcagttccacgactggatgagcccgcggatc
agcgagcggctctccaaatggtatctgccccgctactcggcgagcggcgtctacgagcgg
atggccaagcatcgggtcgacttcctcacggacggcgtgtggaactcgctttcggccgat
gcgccattctgtcttcgcaaccaccgcgtcgccatttcctattcgacgccggaaagctcg
cgtgtctcggccgaggaaatcgtcgccgtgatggacggcctcatctcggtgctcggctcg
atcggggtctccgcgcgcaagatggatccggtcgcgctgatcgggtggatcgacgacatc
acctcgccgaccacggccgcgggcgacgacgtcatcagctacaatccgctcgaccccatc
gctgaccaggcggtgcgccgcgacatcgagatgaaggtcgacccggaccgcatcctgctg
cggaccgaacggttccgtccgaccggcaaggaggtcaacggcgcacccgagatcggcgag
atctatcccgacgtattcgacgtgcgctcgttctcggtccgcaatcttcctcagcgctgg
gcgccctgggactgcgcgcggctgattggcgacatgttcgccgacaagctgcgaatgccg
tgcccggtctccacgaacttgtgcctcgactttcccgatccccaagcctcgagcaacaag
gccggcttcaagttcatgcgcaccacgagcctcgccgactccaagtccgcgcgcttcctt
ccccaactccgcgaccagtcccaggagtggaagttcgtcaatgacgagatccgccagggg
cgcaagctcgtgcgcctgttctacagcgtcacgtcattctctcccaaggggaagggagac
gccaacgagcgcgtcctcaagtcggtctaccgggccgcaggctgggacctgctcgacgac
cgctacctccaggtgatgggcctcttgtgcgcgatgcccatgacgatggcgaacgggctg
tcccgcgacctcgagcgcatgaagcgcatgcggaccatgctcagcacgaccgcggcgaac
ctggctcccatacaaggcgagtatctcggtggtcacacgccgcacctgctcctgatcggc
cgacgggggcagcccttcttctggagcccgttcgagaacgccgcaggcaaccacaacgtg
gcggtgttcggcaagtcgggatcgggcaagtcggtcgccctgcaggagctgtgcgcctcg
ttgtgcggcgcgggatccaaggttgtcgtgatcgacgacggccgctccttcgagcactcg
gccaagctgcagggcggtgccttcgtcgagttcacgatgtcgagcggcttctgcctgaac
ccgttctcgatgatcgacgccgcccaggcggccgaggacgaggactatctcctcgactgc
atggcgatgctcaaggccatcgtgaaccagatgtcccgccacatcgaccggctgaccgac
accgagcgcggcctgatcgacggcgcggtcaaccgcgtctgggaggccaaaggcaggaac
ggctcgatcgacgacgtgatcgccgcgctcaacgagactggcaacgagctcgcctcgcat
ctcgccatcgcgatgatgccgttctcgagcgccggcacctacggcaagttcttccagggt
gaggtctcgttcgagctgcaggcacagctcacggtgttcgagctgtccgacctgtcctcg
cgcgaggaactccgcagcgtcgtcctgaccgcgatcatgttcatgtcgcagcagatgatg
cggaaggtcgaccgctcgattcccaaggcgctgctcctggacgaggcctggcagatgctt
cgcggtggggcgatggccgatttcatcgaaacctacgcccgcacgtgccgcaagtatggc
gcctccttggtgacggccacgcagtcgctcaacgactactacaagtcggccgggtccatc
gcggccctcgagaacagcgactggttcgtgatcctccagcagaagccggaaacgatcgcc
gacttcaagaagcacgatcgcttcgagatggacgactataccgacgcactgctccgctca
ctcaagcgcaacggcttcgaatattccgacatcatgatcaaggggccggagacgctggcg
gtcggccggctggtcctcgatcctttctctgccgcgctgttctcgtcgagtccgcgcacc
tttgctgccatcgaggcgatggttgccggcgggctcagcatggatgaggcgatcgagcgg
atcgcgtttcccgaaaaccccgaaaaatggacgatgcccgccggtgatacggcggcaatc
gctgcggagtga

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