Styela clava (leathery sea squirt): 120325427
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Entry
120325427 CDS
T07291
Name
(RefSeq) vesicular integral-membrane protein VIP36-like
KO
K10082
lectin, mannose-binding 2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120325427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120325427
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sclv04091
]
120325427
Membrane trafficking [BR:
sclv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120325427
Lectins [BR:
sclv04091
]
L-type lectins
120325427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
Motif
Other DBs
NCBI-GeneID:
120325427
NCBI-ProteinID:
XP_039247463
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MANFSKQICVFLSLFLAFSLALDHNEPGFLKRQHSLIKPYTGSSASIPNWDYRDATMITN
SFVRLTPDHQGKRGSLWNRIPVYLRDWELIMSFKIHGGGRTLAADGFAIWYTKQRMEPGP
VFGSRDQFSGLGVFLDTYKNGPQAVTFPFITAMVNNGSMNYDHAGDGRQNSIGSCLASFR
NKDFETSISIRYVKSRLTVSLNVDDGMDWRECFDVGGVTLPVGYFFGVSAATGDLADNHD
IVGVKLYEIDAHRPQGEDDGWGTAVPSVSFFKPPLDNTDESAAGGFRNTAMSGFKIFLIF
ICALLGLGVCVVVGFVVFQKRQEQSRKRFY
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttttcgaagcaaatatgcgttttcttgtccttgttcttggcattttctttg
gcattggaccataacgagcctggatttttaaaaaggcaacacagtctcatcaaaccatat
actggaagtagcgcaagtatacctaattgggattatcgggatgccactatgattacaaat
agtttcgtcagattaacgccagatcatcaagggaaacgaggaagtctttggaatagaata
ccggtgtatttacgagactgggagcttatcatgtcgttcaaaattcacgggggaggcaga
acactggctgctgatggatttgctatttggtatactaaacaacgaatggaacctggtcct
gtgtttgggagtcgcgaccagttcagtgggcttggtgtttttcttgatacttataagaat
ggtccacaagctgtgacgtttccgtttataactgctatggtgaacaatggaagtatgaat
tatgaccatgcaggtgacggtcgtcaaaattcaatcggtagctgtttggcttcatttagg
aataaagattttgaaaccagcatttctatcagatatgtcaaaagcagattaacagtttct
cttaatgtcgacgatggtatggattggagggagtgcttcgatgtagggggagttacgtta
cctgtcggttatttttttggtgtctctgctgccactggtgacctggctgataaccatgac
attgttggtgtaaaattatacgaaattgatgcccacagaccacaaggcgaagatgatggt
tgggggactgcggtaccaagcgtcagctttttcaaaccaccgttagataacactgatgag
tccgcggcaggcggattcagaaacacagcgatgtctgggtttaagatatttttgattttc
atctgtgcattactaggtctcggtgtgtgcgtcgttgtaggtttcgtcgtttttcaaaag
agacaagaacaaagcaggaagagattttattga
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integrated database retrieval system
