Styela clava (leathery sea squirt): 120325536
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Entry
120325536 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: helicase MOV-10-like
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120325536
03036 Chromosome and associated proteins [BR:
sclv03036
]
120325536
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
120325536
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120325536
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
120325536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
Mov-10_helical
PhoH
UvrD-helicase
AAA_16
ATPase_2
AAA_22
AAA
SNF2-rel_dom
SLFN-g3_helicase
NPHP3_N
DEAD
AAA_24
AAA_25
Kinesin
Mg_chelatase
nSTAND3
Coat_X
Motif
Other DBs
NCBI-GeneID:
120325536
NCBI-ProteinID:
XP_039247590
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MNKSEIRDIAEDFLDYLSDANCCQEVRTSKILDAENNIVLSPNSSQLIAVRSLCNVEVSS
TELEVTLRVGNERELLIRYLKFEMVSDSDLSSSSESEEKTQPQSRGEYISLDNFIPGERP
DMLYEKRLKMKWGLPPCHVPNEVKNAIKRGVYNPNKILASRSDTLIKEDLQRALEPSNYK
SKFKRLLHIEEWKHQQDIKMYDMRGVTLTQRKRGSKLLYLKVPGLAEKRPSVLRGDKIYV
RAIGRNGHLEIEIYQGYVHHVEQEEVGLGFNSWIFRTHIKNKIYFVRFEFNRLALKLMHR
SVEAMFSRPDIREILFPVNPPRYLPTKVLKMYNRDIDGNEEQREAVHNIVEGITAPVYII
YGPPGTGKTITMVEVIHQTLRRHPFSHMLVCAPSNSACDLLTSRLLLHVDKREILRMHAA
SRNWGEVPEDVKGVSNYRGEFRFPAKEELMKCRIIVTTLITAGRIASAKFPKEHFDRVFI
DEAGQAMEPETMIAVAGVLSENGKMVLAGDPKQLGPVIRSSIAKSYGLQISFLERLMSTC
DMYQKHNTDYRPQCHNQIVKKLSFSSEYNSSFPKRGIFMTEN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaaatcagagatattgcagaggattttttggactatctgagcgatgcc
aattgttgtcaagaagtcagaacttcgaaaattttagatgccgaaaacaacattgtcctg
tcacctaattcaagtcaacttatcgcggtaagatcactttgtaatgtcgaagttagcagt
acagagttggaggtgacgctaagagttgggaatgagcgcgaacttctcattagatatttg
aaattcgaaatggtgtcggacagtgacctgtcttcttcgtctgaatcagaggaaaaaact
caaccacaaagtagaggtgaatatatttcgctagataacttcatacccggagaaagacct
gatatgctttatgaaaaacgacttaaaatgaaatggggtctacccccatgtcacgttcca
aacgaagttaaaaacgcgattaaaagaggcgtgtacaatccgaataaaatacttgctagc
aggagtgacactttgataaaagaagacttgcaacgcgcacttgaacccagcaattataaa
agcaagttcaagagactgttacatatagaagaatggaaacatcaacaggacataaagatg
tacgacatgcggggtgttactttgacgcaacgaaaaaggggaagtaagcttctgtacttg
aaagttccgggcttggctgaaaaacgaccttctgtcctccgtggcgacaaaatatatgtg
agagcaattggaagaaatggtcatctggaaattgaaatatatcaaggatatgttcaccat
gtcgaacaggaagaagtagggctcggtttcaattcctggatttttcgaacgcacataaaa
aacaaaatttattttgttcgtttcgaattcaaccgcctagctttgaaactaatgcacagg
tcagtggaggcgatgttttctcggcctgacatacgtgaaatcctttttcctgtaaatcct
cccaggtaccttccaactaaagtactgaaaatgtacaatagagatattgatggcaacgaa
gagcagagggaagcggttcataatatcgttgaaggaattacagccccagtatatattata
tacggacctccaggaacaggaaaaactattactatggtagaagttattcatcaaactctc
agacgccacccttttagtcacatgctcgtttgcgccccatccaatagcgcctgtgacctt
ttgacaagtcgactccttcttcacgtagacaaaagagaaattcttcgaatgcatgccgca
tcaagaaattggggagaagtaccagaagatgtaaaaggtgtttcaaactacagaggagaa
tttaggtttcccgctaaagaagaactgatgaaatgtcgtatcattgttacgactctaatc
acagctgggcgtattgcgtcagcaaagttcccaaaagaacattttgacagagtatttata
gacgaagctggacaggcaatggagccggagactatgatagccgtagcaggagtactttca
gagaatggaaaaatggttctggctggagatcctaagcaattgggtccagtaattcgatct
tcgattgcaaagagttacggcctgcaaatatcatttcttgaaagattgatgtccacctgt
gacatgtatcaaaagcacaatactgattacagaccacaatgccataaccaaattgttaaa
aaattatcgttctcatccgagtataatagcagttttccaaaacgcggaatttttatgacg
gagaactaa
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