Styela clava (leathery sea squirt): 120325545
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Entry
120325545 CDS
T07291
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2-like
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120325545
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sclv03310
]
120325545
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120325545
Nuclear receptors [BR:
sclv03310
]
1. Thyroid hormone like
1D. Rev-Erb
120325545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2780
HNH_repeat
Motif
Other DBs
NCBI-GeneID:
120325545
NCBI-ProteinID:
XP_039247599
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MNETRTQTPTLDQILDGEYKFAVLCRVCGDNASGVHYGVDACEGCKGFFRRTTGQNLKYP
VCKLGGNCEINRESRNRCQSCRYETCVKVGMSRKAVKYGRIPKREKVKILKRRYSSWRSY
ARSDENATGSIEKLLKLTTDARKTINHANVLINPAKKAKSKHLPTAKYLIQSRIENEGSG
QSVTRRNHSHLLSAGDGVLNVSRDSGNSVTRQKLVYSACKSNEPHWSPISVVENQKSTSE
KIRQPNFIEALQYDPREKEHGHIQLSTLNKKDQYFSFDKFPERLNENAKGNSLPASNLPY
TPYNQKKRLWSASSHDSSCSSRVECEFSSKDNEYQYSNTLASMNNVVNTNLSNQHSEYKQ
SPCVYDDIANTLRVGFQATFFLAKRGFFLSPEFEGKRHSQLEKATCNVTIQNTSPFNMAI
CEVVEFAKQIPGFTNMLKVVDQIHLLKKGLLEVMLIVMLSGYNPVNQTFLFPDGKQSGLS
ELVSNDMGEFAKCTFDFAEQFSSLGLSPEEVAIFTALVLITCAKNTDSDEAYAGLNVNIN
SVSVKHNIDTGAKCNIPNIHKMT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacaagaacacagactcctacactggatcaaatattggatggtgaatacaaa
tttgctgtactctgtcgagtatgtggtgacaatgcttcgggtgtgcattacggagtagat
gcgtgcgaggggtgcaagggatttttccggcgaaccacgggacagaatctgaaatatcca
gtatgcaaattaggaggaaattgcgaaattaacagagagtctagaaacaggtgtcagtca
tgtagatatgagacatgcgtaaaagtcggaatgtctcgaaaagccgtcaagtatggaaga
ataccaaaaagagaaaaggttaaaattttgaaacgaagatattcatcgtggagaagctat
gctcgatcggatgagaatgctaccgggagcatcgaaaagttactaaagctgacaactgac
gcccgcaaaacaataaatcacgctaatgtattgataaacccggccaagaaagcaaaaagt
aaacatttaccaactgcaaaatatttgatacaaagtcgtatcgaaaacgagggaagcggc
cagtctgtaacaagaagaaaccattcgcacttgctaagtgctggtgatggcgttctcaac
gtttccagagacagtgggaattcagtaacacggcagaaattagtatattctgcctgtaaa
tcaaatgaacctcattggagcccaatatccgtcgttgaaaatcaaaaatccacatctgaa
aaaattaggcagccgaacttcatcgaagctttgcaatatgatccaagggaaaaggaacat
gggcatatccagttgtcgactttgaacaaaaaagatcaatacttttcgtttgataaattt
cccgaacgactgaatgaaaatgcaaagggcaattctttgcctgcctcaaatttgccatac
acaccatacaaccagaagaagcgtttgtggtcagcatcatcccacgacagttcttgctcc
tcccgagttgagtgcgaattttcaagcaaagacaatgaatatcaatacagtaacacattg
gcgagcatgaacaacgtagtaaacacaaatttgagcaatcagcattcggagtacaagcaa
agcccctgtgtatatgatgatattgcaaatacacttcgtgtcggtttccaagccactttt
tttctggccaagcgaggattttttctaagcccagaatttgagggaaagagacacagtcaa
ctcgagaaagcaacatgtaacgttacaatacaaaacacatcaccattcaacatggcgata
tgtgaagtcgttgaattcgcaaaacaaatacctggatttaccaatatgttaaaggtagtg
gatcaaatccatctcttaaaaaaaggattactcgaggtcatgctcatcgttatgttatct
ggttataacccggtcaaccaaacatttctatttccagatggaaaacagagtggtttatct
gaattagtttccaatgatatgggagaattcgccaaatgtacattcgattttgctgaacaa
tttagttcccttggtcttagcccagaagaagttgccatattcacagctttggtactgatt
acctgcgctaagaatactgattctgatgaagcttatgctggtttaaatgtgaatattaac
agtgtcagtgtcaaacacaatattgatactggtgccaaatgcaatattcccaatattcac
aaaatgacttga
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