Styela clava (leathery sea squirt): 120325641
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Entry
120325641 CDS
T07291
Name
(RefSeq) RNA polymerase II-associated protein 1-like isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120325641
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120325641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Arm_vescicular
Motif
Other DBs
NCBI-GeneID:
120325641
NCBI-ProteinID:
XP_039247650
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MFTNRPNSDETEDDLLAFQRDFLASGSKPAATVIKKRKSDEVPVAIHTNDKDIVKIDDDE
LEELNKKPKIQSPFERNDEKDVTYAEKSTSSTTCENANKEDEDMETQMDEHDTHITAVLS
KIEERNMDLMPITFPTFRTSAFPSVFLRADKNVDSANKNTNEFSPRKSIFARQFKNKSLR
DYGMDDKKKNSEAVIVEACPLKPLPEAISINKLKELYPKSRIVSGDGLSQKPSQFSSNEC
QKIHDENIEKISTMSETEILAEKDKLIHELNPTLVKFLQNRSVSKHITKEENFLKDLAKQ
VVEDTSVDREDEISSGDQQMDTENDGNMDEFTTKEKFVNMDIVETEKLAWMEMIPEKHRN
KPKISFRFDFDGNILDDNINIPSHIGLHHHGDEPNLPGYNLQELFILSRSNFTQQRVFSM
TLLGKIIAKAKAGEYVKDTSEPVLKNLLESGILFLLRWSLDEQSETLLQASVFALHSLLC
PSNHTEELPELKFLSNRGCETMKLNPNVGIKQDDTDYEIAEKDVIAGLIKMKILQRIRYI
LEVCRPSPVTINLCLDILIRICKHSIKSSVEIFECPRLVSFIIKFLIPVVKGDIDSGDKP
ENSFKYPFPKAIRLLRMLCIAGRHLTSRLLNDHRDVQALIVRYVANDQDENYSETEQEVL
KLWIVCCSYGFLCDLFSELFQIIILQIQSCTTMLSSHNKNGDSEFNERSLKKCGLILKLC
SVVFSSTKIENTSQCEEIGQLNEVIMSLATDIFQSNQLSNSVSLLLITTDFLTSYLEMQS
NDSKYSSVNLASYSERLSDNVLPSIYKCIQLLKFENLVGDQISEKIPSLPEIDVGLSNSE
DLMKFQLLSSYLQCCVTICRINKNCCQAPVFQSTITHIVENYQWMLSSDGCGSNYYMKAK
IYCLYWSVNLYQLMVTNFGKNFTQHGHFFYIAAFRCFTQLGSGDEHLMHCLLSSVIFHPD
LIRNALNPTTVLTQSMASMDVSKSLSAMASDPDSTISSAVSSLSSIRSTFISSLYVDPKI
LSESRDRIHKKVDIIATFLLRSNENESSVPADWPFIPLLQIYDQSISRGELPGGSLTHIS
NSLLYLCLLEYSCKDCLASVSVTAKIVRLMCVFLAGNDIFLTSNVKKCLMFLFSHYCDLK
SSQLLDFSCPIPGISSFYDFYISLLEQYEGVSYGDELFSAVVLLPLHQLNNGINDIKKAL
WSDRRDILRILSLPISKLLIPVSWYLFPVENDVFMIRSYVSALAQGYCSALRCPVPYLMA
IHHTAQFLFNDEVDVSLESRKEIYRGVLKIKQDEIRKHIFHYISPEEGITGFRFSSEMAA
DRKRTIAFLSV
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaacagaccgaattcagacgaaacggaagatgatttactggcgtttcaacgg
gattttctcgcaagtggatctaaacctgcagcaacagtgatcaaaaaacgcaaaagtgat
gaagttccagttgctatacatactaatgacaaagatatcgtgaaaatagatgacgatgaa
ctagaagaattgaacaaaaagcccaaaatacagtccccctttgaaaggaatgatgaaaag
gatgttacatatgcagagaaaagtacaagttcaacaacatgtgaaaatgcaaacaaagag
gatgaagatatggaaacacaaatggatgaacatgacactcacattacagcagttctgagt
aaaattgaggaacgtaatatggatctaatgccaataacatttcctacttttagaacaagt
gcatttccatctgtatttctcagggcagacaaaaacgtagactctgccaataaaaataca
aatgaatttagtccacggaagagcatttttgcaagacaattcaagaataaatcattaagg
gattacggtatggatgataaaaagaaaaatagtgaagcggttattgtggaagcatgtcca
ttgaaaccacttccagaggcaatttcaattaacaaactgaaggaattatatccaaaatca
agaatagtatctggggatggcctatcacaaaagccatcgcaattttcaagcaacgaatgt
cagaaaattcatgatgaaaatatagaaaaaatttcaactatgtctgaaacagaaatactt
gcagaaaaagataaactgattcatgaattgaatccaacattggtgaaatttttacaaaat
cgatctgtgtcaaaacatataacaaaggaagagaactttttgaaagatttagcgaagcaa
gtcgtggaggacaccagtgtcgatcgggaagatgaaatcagttcaggagatcaacaaatg
gatacagaaaatgatggcaatatggatgagtttacaacaaaagaaaaatttgtaaacatg
gatattgttgaaacagaaaaattagcatggatggaaatgattcctgaaaaacacaggaac
aaacctaaaatatctttcaggtttgattttgatggcaatattttggatgacaacattaat
attccatctcatattggtcttcatcatcatggtgatgaacctaatttacctggttataat
ctgcaagaactatttatactttcacgttcaaattttactcaacaaagggttttttcaatg
acgttacttgggaaaattatagcgaaggctaaagcaggtgaatatgtcaaagacacttct
gaaccagtactgaagaatttactcgaatcaggaatattatttctattgcgttggtctctt
gatgaacagtctgaaactcttcttcaagcttccgtatttgcattacactcattgctttgt
ccatctaatcatactgaggaacttcctgagttgaagtttttatcaaatcgtggttgtgag
acaatgaaattaaaccccaatgttggtataaaacaagatgacactgattatgaaattgct
gagaaagatgttattgctggtcttatcaaaatgaaaatcttacaaagaataagatatatt
ctagaagtttgtcgaccatcacctgtgactataaatctttgtttggatattttaataagg
atttgtaaacattccatcaaatcatcagttgaaatattcgaatgtccaagattggtttcc
ttcattatcaagtttttgattcctgttgttaagggtgatattgattctggagacaaacca
gaaaattcttttaaatatccatttccgaaagctatcagattactaagaatgttatgtatc
gctggaagacatctcacatctcgattattaaatgaccacagagatgttcaagcattaata
gtgagatatgttgctaatgatcaagatgaaaattattcagaaactgagcaagaagttctg
aaattatggattgtctgttgctcgtatggatttctctgtgacttattcagcgaattattt
caaattatcattttacaaatccaatcatgtaccacaatgttatcttctcataacaaaaac
ggtgattcagaattcaatgaaagatcactgaaaaaatgtggattgattttaaaattatgt
tcagttgttttctcatctacaaaaattgagaatacatctcaatgcgaagaaataggtcaa
ctaaatgaggttattatgagccttgcaacagatatatttcaaagtaatcaacttagtaat
tcagtttcattacttctaataacaaccgattttctgacatcatatttggaaatgcagagt
aatgattcgaaatatagttctgtgaatctggcatcttactcagaaagattgtcagataat
gttctaccctctatctacaagtgtatacaacttctcaagtttgaaaatcttgttggtgat
cagataagtgaaaaaataccatcattgccagaaattgatgttggattatcaaattcagaa
gatttaatgaagtttcaacttctttcatcttatcttcaatgttgtgtcacaatctgcaga
attaataagaactgctgtcaagctccagtgtttcaatccaccattacacacatagtagaa
aattatcaatggatgttatcttctgatggatgtggatctaattattacatgaaagccaaa
atatattgtttgtattggtcagtcaacctttatcaattgatggtcacaaattttggaaaa
aatttcactcagcatggacatttcttctacatagcagcatttcgatgttttacacaactt
ggctctggtgatgagcacttgatgcattgcttgttgtcttccgtcatttttcatcctgat
ttaataagaaatgctctaaatccaaccacggttctaacacagtcaatggcatctatggat
gtttctaaaagtttatcagcaatggcgagtgatccagatagtacaatttcttcagcagta
tcaagtctttcatctatccgttctacattcatttcaagtctatatgttgatccaaaaata
ctctcggagtccagagacagaattcataagaaagttgatattattgcaacctttctgttg
agatctaatgaaaatgagtcatctgtccctgcagattggccgttcatacctttgttacaa
atatatgatcaaagtatttccaggggtgaactacctggaggaagtttaacacatatttcg
aatagtttgttgtatctttgtcttttggaatattcttgtaaagattgccttgcgtctgtt
tctgtaactgcaaagattgttcgcctgatgtgtgtttttctggcgggaaatgacattttt
cttacatccaatgtgaaaaaatgcttaatgttcttgttttctcattattgtgatctcaaa
tcatcgcaattactcgacttctcatgcccaattccgggaatatcatcattctatgatttc
tatatatcactcttggaacaatacgaaggagtatcgtatggtgacgaattgttttctgca
gttgtattacttcctttacatcagttgaataatggcatcaatgatattaagaaagcatta
tggtccgatagaagagatatattgcggatactgagtctgccaatatcaaagctattgatt
ccagtgtcatggtatttgtttccagtcgaaaacgatgtatttatgattcgctcctatgtc
agtgctttagctcaaggttattgttcagctttgagatgtcctgtaccttatttgatggca
attcatcatacagcgcaatttctattcaatgatgaggttgatgtatcgttggaaagtaga
aaggagatataccgtggcgttttgaaaatcaaacaagatgaaattcgtaaacatattttt
cattatatttctcctgaagagggtatcaccggatttcgattttcctctgaaatggcagcg
gacagaaaaaggacaatagcatttttgtccgtgtga
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