Styela clava (leathery sea squirt): 120325680
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Entry
120325680 CDS
T07291
Name
(RefSeq) TBC1 domain family member 1-like
KO
K17902
TBC1 domain family member 4
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120325680
Membrane trafficking [BR:
sclv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120325680
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120325680
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120325680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PID
DUF3350
Motif
Other DBs
NCBI-GeneID:
120325680
NCBI-ProteinID:
XP_039247708
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MESVDTSYSLQYLGYSLIHSYFTESMLQWIIGEIELSRRAHNVSMILSMHGLELKKSFVS
RIPSTSDKNVNSPDATTDGMNLAENLIKFDDLGNSHNDNIDVVGMNYPIPHVVESILHIK
YNVILHAKKIQHKQSSYFVFLTREHKDLPIQCHAFRGELNLLTIISQDIEKRIKLEGKNG
VTCVFDNASHSSSGHEINDNDCVRFEVMLIGIVNLKNPDPPHTLIDEAVTQFDERYKKLK
QQRNEHTNDGYKTSVTQHVSTPPDYIDSGSPPSSYIDDSREGSIHMLQQMRKRCGSMDHH
TQKPTGIRRRQRHCSEPSTYGNDLKKTRIRLFQIGHKSVKMICPNKTVQNCEIGFSNISR
CMQGIKHRDHFGIIANSIENKKQGQDDQHNAKHTNNMKKIICYVFKCAEDYICEEIMQGI
RQAFTTCFNETSPMQEFDELCKDINAASPQDALTLAKQKMRDLNENEIQSIKAQILEINP
KNSEDKLAAFMAALRQLYEVKHVEYLTETKATKGSPVQTHSDESASSKFDNIKSKAMSSF
GSLLQKGKKKMQELQLDSDLMSDKLATSPVNKFKMFSESLSSSVPTTPQKNFAPQGLPSG
SDEGSRIRKRSTSLGSRPASMEFSAKSSTSPLLFYHNIFYSITNTGPCAKPGHTPAVGCH
LDKLKTIKEKPYKRHKTVEDIHRAWKWAISQQILLNKINAIIAKPANNMLSDYKYNSSSE
FSDFDPIPDEMEDIWTELFRLSVEQKEKIEKRVLYAAVRKGVLSTYRARVWKLLRLHCHV
DDEDNMRSKSNIGEYPKLLDNLTSYQHAILIDIGRTFPSHPMYSQLLGPGQLSLFNVLKA
YSLYDEEVGYCQGLSFIAGVLLMHTCVEDEAYQLLYCLMHEIGCRNMYLPDMTGMKLAMY
KITRLLYDIDLEIFQFFERHEITMMLVATPWFLTMFASTFPMNFVARVFDMVFVDGTPAL
FKVAICLLREHKSKFMQLDDFEDTVNYIRTEIPKSDRKTLSNVIENAMGMNFDSELKEYE
VEYRILHEELPIYTYHTETEKNLREQIQCIENVNHKVTESNCDLLRQLHDAQRKIALLQK
QLKEANKSGRNGN
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtagacacttcatattctctccagtatttgggttacagtttgatacattca
tatttcactgaatcaatgcttcaatggattattggagaaatagagctcagcagaagagct
cacaatgtatcaatgatattatcaatgcatggtttggaactaaaaaagagctttgtgtca
aggataccaagtacatctgataaaaatgttaacagtcctgatgcaactactgatggaatg
aatttagctgaaaatttaattaaatttgatgatcttggcaactcacataatgataacatt
gatgttgttggcatgaattatccgataccccatgttgttgaaagcatattacatataaag
tataatgttatattgcatgcaaaaaaaatacagcataaacaatcttcatattttgttttt
ttgactcgagagcacaaagatctgccaatacaatgccatgcatttagaggtgaattgaat
ctactgaccatcatcagccaagacattgaaaaaagaattaaactagaaggaaagaatgga
gtgacttgtgtttttgacaacgctagtcattcatcgagcggacatgaaattaatgataat
gactgtgtaagatttgaagttatgttaattggaattgtcaatctaaaaaatccagatcct
cctcacactcttatagatgaagcagtcactcagtttgatgaaagatacaaaaagcttaaa
cagcaaagaaatgaacacactaatgatggttataaaactagtgtcacacaacatgtttca
acacctcctgattatatagattcaggatccccaccttcatcctatattgatgattcaagg
gagggatctatacatatgctgcaacaaatgcgaaagcgttgtggctctatggatcatcat
acgcaaaaaccaacaggcatccgtcgaagacaaagacattgcagtgaacctagcacttat
ggcaatgacttgaaaaaaactcgaataagactttttcaaattggccataaatctgttaaa
atgatctgtccaaataaaaccgtccaaaactgtgaaataggcttttcaaatatatctcgt
tgtatgcaaggcataaagcatcgtgatcattttggaattattgcaaatagtatcgaaaat
aagaagcaaggtcaagatgaccaacacaatgctaaacacacaaataacatgaaaaaaatt
atctgttatgtattcaaatgtgcagaagattacatttgtgaagaaatcatgcagggcatt
cgacaagcatttacaacatgttttaacgagacttcacccatgcaagaatttgatgagctc
tgcaaggatatcaatgccgcatcaccacaagatgcattaaccttggccaagcaaaaaatg
agagatttaaacgaaaatgaaattcagtctatcaaagcacaaattttagagataaatcct
aagaactctgaagataaacttgctgcatttatggctgcattacgacaactgtatgaagta
aaacacgttgaatatctaactgaaactaaagcgactaaaggttctcctgttcaaactcat
tctgatgagtctgcaagcagcaagtttgacaacattaaaagtaaggcaatgagttcattc
ggaagtttacttcaaaaaggaaaaaagaaaatgcaagaattgcagcttgattcagatttg
atgtcggacaaacttgccacaagtccagtgaataagttcaaaatgttttctgaaagtctt
tctagttctgtacccaccacgccacagaaaaatttcgccccacaaggtttgccaagtggt
tccgatgaaggcagtcgtattagaaaacgatcaacatcattaggttccaggcctgccagt
atggaattctctgccaagtcttctacgtcgccattgctattctatcataacatattttac
agcatcacaaatactggtccttgtgcaaaaccaggtcatacaccagctgtggggtgtcat
ttggacaaactaaaaacaatcaaggaaaaaccatataaacgtcacaaaactgttgaagat
attcatagagcatggaaatgggcaatcagtcagcagatattgctcaacaaaataaatgct
attattgctaaacctgccaataatatgttatctgattacaaatataattcttcgagtgaa
ttttctgattttgacccaattcctgatgaaatggaagatatatggactgagttgtttcgt
ttgtctgttgaacaaaaagagaaaattgagaagagagttctttatgcagcagttcgtaaa
ggtgttctcagcacgtatcgtgccagagtttggaaattattgcgactgcattgtcatgtt
gatgatgaagataatatgagatcgaagtctaatattggagagtatcccaagctgcttgat
aacctgacttcttatcaacatgctattctgattgacatcgggaggacttttccgtctcat
ccaatgtatagccagctacttgggcctggacagctcagtctttttaatgtcctgaaagct
tattctttgtatgatgaagaagttggatattgccaaggtttgtcttttattgctggtgta
cttctcatgcatacatgcgttgaggatgaagcatatcaattattgtactgccttatgcac
gaaattggttgccgtaacatgtatctaccagatatgacaggcatgaaattagccatgtat
aaaataactagactgttgtatgacatcgacttggaaatatttcaattttttgaacgacat
gagattacaatgatgcttgtagctactccgtggtttttaacaatgtttgcctcaacgttt
cctatgaactttgttgcacgcgtttttgacatggtatttgttgatgggacacctgcatta
tttaaagttgcgatttgtttgcttcgagaacataaaagcaaattcatgcaacttgatgat
tttgaagatactgtcaactatatcagaacagaaatcccaaaaagtgatcgtaaaactttg
tcaaatgtgattgagaatgctatgggaatgaattttgattcagaattgaaggaatatgaa
gtggaatataggatattgcatgaagaattgccaatctatacttaccacacagagactgag
aagaatcttcgtgagcagattcaatgcattgaaaacgtgaatcataaggtaacggaaagt
aattgtgacttgctgagacaacttcacgatgcccagcgtaaaattgcactattgcagaaa
caactgaaagaagctaataaaagtggtaggaatggaaattag
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