Styela clava (leathery sea squirt): 120325711
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Entry
120325711 CDS
T07291
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120325711
03021 Transcription machinery [BR:
sclv03021
]
120325711
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120325711
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120325711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
PsV_CP_C
Homeobox_KN
Diphtheria_T
Motif
Other DBs
NCBI-GeneID:
120325711
NCBI-ProteinID:
XP_039247756
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MNSSNVPFQQRFIEVQEVDNKLEKGKSIDRIASELQKKDSRNHKEPSPQRNHTLGHFNLE
ETLQRFRPPVSDIDHLVTRGHHMLNLGQHPYRRHSEEEFPSDRSNSDSPPNMIQMQHQTL
SQSFSSDSSNEYEEGSKKKKFMDEASELENLELFAKEFKQKRIKLGFTQGDVGVAMGKLY
GTDFSQTTISRFEALNLSVKNMCKLKPLLERWLQDVARVARGDGNEGGRLSLPQPVIPVP
QPPILSGRRRKKRTSIPTEGKTRLEVAFKKNPKPTSEDIYKFSEDLNLDREVVRVWFCNR
RQKEKRITIQQQQYIGEDSPPPSSPQGFSSQGGSNSQRPTERSQSPSSDDDSAFHTSQHL
PPIIQSRYESHLNEHSPAAYSKQAQGVDELTAAANSAAKAVSVPQAVPAGGESLLPMTTR
FYSGTSLVSPTTMTTRPDIIRPGFMPGIPLHPPPSLRPQNFNSLLSSYPPSTSLLTMKTE
STS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaagcaacgttccctttcagcaaagatttattgaagtgcaagaagttgataac
aagttagaaaaaggaaaaagtattgatagaattgcttcggaacttcagaaaaaagactcc
agaaatcataaggagccaagtccccaaaggaatcatacgctcggccactttaatttagaa
gaaactttgcaacgtttccgaccacctgtctcagacattgatcatcttgtcactagaggg
catcacatgttaaatttggggcaacacccctatcgacggcactcagaggaagagtttccg
tcagatcgctccaactctgattctcctccgaatatgatacagatgcaacatcagacattg
tcacagtcattctcatcagacagttctaacgaatacgaagaaggatcaaagaaaaagaaa
tttatggatgaggcttcggaactcgaaaatcttgaattattcgcgaaagaattcaaacag
aaaagaataaagcttggattcactcagggcgatgtaggagttgcgatggggaagctttac
ggaacagatttcagccaaacgaccatatcaagattcgaggctcttaatttgagtgtgaag
aatatgtgcaaattgaagcctctacttgaaagatggctgcaagatgtggcgagggttgca
agaggagacggcaatgaaggtggtcgtctctcactacctcagcctgtgatccccgtacct
caaccaccgatactttctggcagacgtagaaagaaaagaacaagcattcctaccgaagga
aaaactagattagaagttgcttttaaaaagaacccgaaaccaacatcagaggacatttat
aaattctccgaagatttgaacttggatcgggaggttgtgagagtctggttttgcaatcgg
aggcaaaaagagaaaagaataactatccaacaacaacagtatattggagaggattctcct
cctccaagctcgccacaggggttcagttcccagggaggttcaaactcacaaaggcccaca
gaaagatcgcagtctccctctagtgatgatgattcagcattccacacatctcaacattta
ccaccgattatccaatcacggtacgaatcacacttgaatgaacacagccctgctgcttat
tcaaaacaggctcagggtgtagacgagctaacagcagcagcaaactccgcagccaaggct
gtttcagttcctcaagcagttcctgctgggggtgaaagtttgttgccaatgactacaaga
ttttattctggaacgtctctggtatcacccaccacgatgactacacggccagatattata
agacctggttttatgccgggtattcccctacatccacccccctcactcaggccccaaaat
ttcaattccctattgtcttcttacccccccagcacttcgctcttgacaatgaaaacagaa
tctacatcttga
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