Styela clava (leathery sea squirt): 120325748
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Entry
120325748 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase RNF213-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120325748
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120325748
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120325748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZnF_RZ-type
zf-C3HC4_3
zf-C3HC4
AAA_5
AAA
zf-C3HC4_2
AAA_22
zf-RING_5
zf-RING_UBOX
ABC_tran
zf-C3HC4_4
Prok-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120325748
NCBI-ProteinID:
XP_039247826
LinkDB
All DBs
Position
Unknown
AA seq
2739 aa
AA seq
DB search
MDLEKDFDSYSRQEKLIRLRRVLGVEDDYDQYDPDPSYELTTDNVLKILAIYMRFRCQIP
VIIMGETGCGKTRLVEFMSKLKAGRPKANTIEKVQNMITLKIHGGITVDDIHKSVKNAKE
AEVMNREKHNLTTTLFYDEANTTEAIYAIKEVMCDLSIGGKSFEDSRLQLVAACNPYKKL
SQEAIKKLEDSGLGYRIHTSETAHLFGNIPVRTLVYRVVALPPSMQPFVWDFGQLNDHAE
KIYIEQMTKKLATDLKLNEETISIINLVLSQSQRFMRTRKDECRYVSLRDVERCMITFKW
FFEHQDVIFDHIEKEVEESCKKAQKPIPEINREIRIIIQTVGVCYHASLDDRQAFRKVLV
KNLAIANVDESYINMELTACQSVFLRNIRIGDNIACNKALKENVYMMAICADMKIPLFLI
GKPGSSKSLAKTIITNNMQGQTSHAPLYRNLKQIHILSYQCSALTDAAGIKSVFKQCAQL
QKKQDLKTFTAVVVLDEIGLAEDSANMPLKVLHPLLERRSTDLTTVLQPDDERVGFVGIS
NWALDPAKMNRGIFLTRSKPTELDLKKTGKDIVQNTNLWRINEDIFESLTEAYLEVYNVV
QEKEYFGLRDYYSLMKMLCHKLATVKKNEISFEDVVYAVLRNFSGGPTGVHDTIIEKVFN
VFKEQSGDSTLAIPNIPLQNMICDNLCETESRFLLLLANQFSVVHLLEYCIKNNNRGFHV
VFGSSFPGDHSYTEICRNINRIKVCMETGKTVILLNMTEIHESLYDALNQHFVTLGGQNY
VDLGLGGHRVKSRISKDFRLIVIEKKDCVFHKYPIPLINRLEKHHFNSESLLDEASRIES
EELSSWASNFTKLKKSTFVESDAFVGFHDDTISSVVLTTDFTNELECEQSYCPYKFTLLQ
SCSMDALLRLNNSSLCTAEVDMALEVYFRQQCHDRLVDVLNRCIEENQKLSCMEIISYSS
ILSENDKYVLEQQLGNIDVKPIITRWSLQLFHTQQEYSDKLDVFFNQCSKPIESCTKSVH
ILLVQCAQAQINSSLIACAQHCLTNKLLEFKNKSNNNSNATVVIAMLLSIERECKLGSKS
EALVLQHTQEFNIIYVDELRPTDHHLAPASKFLGKSLSEVFEIGKQELELKNEEVLVNMK
SLLSDSVCEAVAKVESEKKQSNRYFKRIEILKKLFLENKDANKYFCKLLLDKMVTVLLEK
HEQNDNKDWIESEALNRENLQEGGTFRKTIWLCLKKHAARILACVVSVIDRDNNMDLIEN
ESVAPWLTNMWLSMFELLDITWTDVTKSAKFTIPGSMYANKCCQLPFSFIIIDFLNTEYA
LESKHCRNLNEVFPGLFQNQKMYEVVVNALKSAQISVMKAFVSDLVTTLYIPGSDDANEA
KLIEDTIFKMSLTAFKTARHRPEFHSGGEIAIIFLTYKELERKLQIFSTVVHACPKILEN
AKTWEKNQSEAFILHLEAAKDTLKILKNMAEKIDKPKECVEWLKLMRCFKNIYGSIVHDI
KDDSKSWISLSLLDSLLQCVLPISHENVFFEKILKVIAPQAKLFWRGSVMSDPKSYQFLR
IVGNVLKRCYQDIQLKLLIGLGDFKCHLCRSRIKSPTNLPCGHYACEGCVATILNLQDER
QKCPICIQDIPEDFVPTATPLNKHQSVILQELKLNCTNFFLKYLKEFCFKKQRDFSDEMS
RMKQHIELILEKFVLHSRREENEEIDSTALDININTRSSILQILLSFNPTLVTDKINQDM
AKLNTADFQSFVIVGLKHFEENAKGNYTRKYDKTVKYWEEILAKAKQYFQTDNFADIQTL
ALIKRIANIRSAVCYFVLYVNDILRETESRMDSNDALIETGLSLMTSSYTPQSVKDFFIK
MGCHKFGTQWLAKLGNHAKLKVLIPPSLQQVAETSVVDYWYLLGDDFKDIKSQLFQTPIE
DFERFVEDLLSDHTNSLQKLFALFSWLKEKENATIGKIVNIIKDKTQNTPLVPINEVILQ
YSVNHFSTFQEAHTLYQIIMISVVAATSQNGIMKGFSSIIKNLNTIENVYLPSMPEHFLF
ALPGDYRLDANRRNTMYVCACGYLYSIGDCTQPNQRRECPECKRSIGGVNSILEPGNQKM
NLTEESQAGYKIDSGTHAMSLAADRLSHQGAAVVQFILHSCMLAGLTENCQPIFRMISVK
NKTEAKKFIIEKLHKNLQDLSKALSRNVDDCVLILMRILLRIINKGAVAYPQNWSTIESR
REWEKVFQNEYLLPVFQDIDTQIQDAKQLMKQAEDDEREPLNRLLNDVNSDDEIEKRFDW
KHCFFWNYFSQPTPEHLLQVLSDKTEKGHGEVLKLILQTPDIYLLMHLEDILKLQHVMIE
RYKYNIDMQEADQRTFEDHVHQDGFDDEALIEKYIIAWNFICPQLQDFAPSLLKNYFVPI
TKQSSLSVALPSMRGRGQCAKLLAEYLIEIQNSFLSSCHRAMRLAERNEYADVLQLVSND
FICTKKQDLLLLINEHTKYDILTNEQEKQHLMSYNIDALEKQVQEEFVRGKKLIDKKTLP
CMSYPQDVGIGVDWGRVVATTNQIPLTAKLSQDIDRLVSKCHSSEICEVVRTLTNAITFL
SKVKIRSERPLCDFLEKDLKMMSAQTSMIPRSTNTCHVLSLYQRLTWHKSVMFSHRGLDP
YKETLFTVNQEEIPDYIREKVEDTFKQMDVVMLQQRINEMLINFPESNADWSLVEDLFPN
IQFIDGNEDDSWYSKLPKELCCKHISDLFSLSVKFLLSN
NT seq
8220 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaaaaagattttgatagttattctaggcaagaaaagttgattcgtttgcga
cgtgtgttgggcgtagaagatgactatgaccagtatgaccctgatccaagctatgaactc
acaactgataacgtcctaaaaattcttgcaatttatatgagatttcgctgccaaatccct
gtgatcatcatgggtgaaactggatgtggcaagacaagattagttgagtttatgagtaaa
ttaaaagctggtagaccaaaggccaatactattgagaaagttcaaaatatgattactctg
aaaattcatggtggaataactgttgatgatattcataaaagtgtcaaaaatgctaaagag
gctgaagttatgaacagggaaaagcacaatctgacaacaacattattttatgatgaagca
aatacaacagaagcaatttatgcaatcaaggaagttatgtgtgatcttagtattggcgga
aagtcttttgaagactcaagattgcaacttgttgctgcgtgcaatccttataaaaaactt
tcacaagaagccattaagaaattggaggattctggacttggatatcgaattcatacaagt
gaaacggctcatttatttggcaatatcccagttcgtacactggtatacagagttgttgca
ttgcctccaagcatgcaaccattcgtatgggacttcgggcagttgaatgatcatgcagaa
aaaatttatatagagcagatgacgaaaaaacttgcaactgatcttaagttgaatgaggaa
acaatttcgatcattaaccttgtgctttcacaatcacaaagattcatgaggacaagaaaa
gatgagtgcagatatgtcagtctacgggatgtggagaggtgcatgataacattcaaatgg
ttctttgaacatcaggatgttatttttgaccatattgaaaaagaagttgaagaatcttgt
aaaaaggcacaaaaaccaattcctgaaatcaacagagaaatccgaataataatacaaact
gttggagtttgttaccatgcatcacttgatgatagacaagcttttcgaaaagttttggta
aagaatcttgcaatagcaaatgttgatgaaagttacataaacatggagctcacagcatgt
cagtctgtgtttttacgcaacataagaataggagataacatcgcttgcaataaagctctg
aaagaaaatgtttatatgatggccatctgtgctgatatgaaaattccattgttcttgatt
ggcaaaccgggaagctcaaagtcattggcaaaaacaattataaccaacaatatgcaaggg
cagacttcacatgcacctttgtacagaaacttgaaacagattcatatactttcataccaa
tgtagtgcactcactgatgcagcaggaatcaaaagcgtttttaagcaatgtgctcagctg
caaaagaaacaggatttgaaaacgtttactgctgttgtagttttggatgaaatcggtctt
gctgaagattctgctaacatgccactgaaagttcttcatccgcttctggagcgtcgaagt
acagatctaactactgtcttacaacctgatgatgaaagagttgggtttgttggaatctcc
aattgggctctggatcctgcaaaaatgaatagaggaatattcctgacaagaagtaaacct
accgaacttgacttaaaaaagacaggaaaagatatcgttcaaaataccaacttatggaga
atcaatgaagacatttttgaatctttgacagaagcttatctggaagtttacaatgtagtt
caggaaaaagaatattttgggctgagagattattatagcctcatgaaaatgctttgccac
aagcttgcaactgttaaaaaaaatgaaattagctttgaagatgttgtttatgccgttctt
cgaaattttagtggagggcccacaggagttcatgatacaattatagaaaaagtcttcaat
gtatttaaagaacaaagtggcgatagcactcttgcaattcctaatattcccttgcaaaat
atgatttgcgataatctttgtgaaacagaaagcagatttttacttcttctggctaaccag
ttttcagttgtccacttgttagaatattgcattaaaaataacaatagaggatttcatgtt
gtgtttggttcgagttttccaggagatcacagttacactgaaatatgtagaaatataaat
agaattaaagtatgcatggaaactggaaaaactgtaattcttctcaacatgaccgaaata
cacgaatcactctatgatgctcttaaccaacattttgtgacattagggggacaaaattat
gttgaccttggtcttggaggccacagggtcaaatccagaatttccaaagattttagacta
attgttattgagaaaaaagactgcgtttttcataaatatccaataccattgataaatagg
cttgaaaaacaccatttcaactcagaaagtcttttggatgaggcttcaagaattgaatcc
gaagagttatcctcgtgggcttcaaattttaccaagttgaaaaaatcgacatttgtcgaa
agcgatgcatttgttggatttcatgatgatacaattagttctgttgttctgaccacagat
tttactaatgaacttgaatgtgagcagtcttattgtccgtacaaatttactcttctgcag
tcttgttcaatggatgcattgttgaggttgaacaattcaagtctatgtactgctgaagtg
gatatggctttggaagtttactttaggcaacaatgtcatgacagacttgttgatgtattg
aatagatgcattgaagaaaaccagaaactttcatgtatggagattatttcgtactcaagc
atattgtctgaaaatgataaatatgttcttgaacaacaacttggaaatatagatgttaaa
ccaataataacacgttggtcacttcaacttttccatacacagcaagaatattctgataaa
ctcgatgttttttttaatcagtgcagtaaacccattgaaagttgcaccaaaagcgtccat
attctgcttgttcaatgtgcgcaggcacaaataaatagttctcttatagcttgtgcacaa
cattgtttgacgaataaattactggagttcaaaaataaatcaaataataattctaatgcc
actgttgtcattgcaatgttgttatcaattgaaagagaatgcaaattgggatcaaaatct
gaagcacttgtactgcaacatacacaagaattcaatatcatttatgtggatgagctccgt
cctactgaccaccaccttgctccagctagcaagtttttaggcaaatctttgtcagaagta
tttgagattggcaagcaagagctagaattgaagaatgaagaagttcttgtgaatatgaag
tctctcctaagtgatagtgtatgtgaagcggtggcaaaagtagaaagcgaaaaaaaacag
agcaatagatacttcaagcgtattgaaatactgaaaaaattgtttttggaaaataaagat
gccaataaatatttctgcaaacttctgcttgataaaatggtaactgttttgttggaaaaa
catgaacaaaatgataataaagattggattgaatcagaagctttgaacagagaaaacttg
caagagggagggacattcagaaaaactatctggctttgtttgaagaagcatgccgctcgc
attcttgcatgtgttgttagtgtcattgatcgagacaataacatggatcttattgaaaac
gaatctgtcgctccctggttaaccaacatgtggttgagcatgttcgagctactagacata
acctggacagatgtgactaaatcagcaaaattcaccatacccggatcaatgtatgctaac
aaatgttgtcaattgccattcagctttataatcattgattttctcaatacagaatatgct
ttagaatctaagcactgcagaaatcttaatgaagtatttcctggattgtttcaaaatcaa
aaaatgtatgaagtcgttgttaatgctttgaagagtgcacaaatttctgttatgaaggca
tttgtaagtgatcttgtaacaactctgtacattcctggttcggatgatgcgaatgaagcc
aaacttatcgaagatactatttttaaaatgtctctgacagctttcaaaactgctcgacac
agaccagagtttcattctgggggagaaattgcaataatattcctgacatacaaagaactt
gagaggaagttacagatattttcaacagttgttcatgcttgtccaaaaatattggaaaat
gcaaagacctgggaaaagaatcaatctgaagcattcattcttcatcttgaagcagcaaaa
gacacattaaaaattttgaaaaatatggcagaaaagattgacaaaccaaaagagtgtgtc
gaatggttgaagttgatgagatgtttcaaaaatatatatggatctatagttcatgatata
aaagatgacagcaagtcatggatatcattgtccctactcgattcacttcttcaatgtgtt
cttcctatttcgcatgaaaatgtattttttgagaaaattttaaaagtgattgcaccgcaa
gcaaaactattttggcgaggttcagtaatgtctgatccaaaatcatatcagtttttacgc
attgttggcaatgttttgaaaagatgttaccaggacattcaactgaaacttttgattggc
ttgggcgacttcaagtgtcatctttgcagatctaggatcaagagccctactaacttgcca
tgtggccattatgcatgtgaaggatgtgttgccaccattctgaatttgcaagatgaaagg
caaaaatgtccaatttgcattcaggatattcctgaagattttgtccctactgctacaccc
ctgaataaacatcaatctgttattttgcaggaacttaaactgaattgtacaaattttttc
ttgaaatacttgaaagagttttgcttcaagaaacagagggacttttcagatgaaatgagt
cggatgaaacagcatattgaattgattttagaaaagttcgttctccatagtagaagagaa
gaaaatgaagaaattgattccactgcattggatatcaatattaataccagaagttcaatt
ttgcaaattttactcagttttaatcctactttagttactgataaaataaatcaggatatg
gcaaaactgaatacagcagattttcagtcattcgttatagttgggcttaaacattttgaa
gagaatgcaaaaggaaattatacgagaaagtatgacaagactgtcaaatactgggaggaa
atattagctaaagcaaagcaatattttcaaacagataacttcgcagatattcaaactttg
gccttgataaaaagaattgctaatataagatctgctgtctgttatttcgttctctatgtc
aatgatattttgcgagagactgagagcagaatggattccaatgatgcattgattgaaact
ggtctgagtcttatgacaagttcctatactccacagtcagtaaaagattttttcataaaa
atgggatgccacaagttcggaacgcagtggcttgctaaattaggaaatcatgcaaaattg
aaggttctaattccgccttcactccaacaagttgctgaaacttcggttgttgattactgg
tatttgttaggagatgatttcaaggatatcaagtctcaattattccagacacctattgaa
gattttgaacgctttgttgaagacttgttgagtgaccataccaacagtctgcaaaagctt
tttgctttgttttcatggcttaaggagaaagagaatgcaacaattgggaaaatagtaaat
attatcaaggataaaactcagaatactcctttggtgcctatcaatgaagttattttacag
tactcggtgaatcatttttcaacttttcaagaggcacataccttatatcaaatcatcatg
atatctgtggtagcagcaactagtcaaaatggaattatgaaaggattcagttcgattata
aaaaatctgaatactatagaaaatgtttatcttccaagtatgccagaacattttctattt
gcactccctggtgattatagattagatgctaatagacgaaatacaatgtatgtttgtgcc
tgtggatatctttatagcattggtgactgcacacaacccaatcaacgcagagaatgtcct
gagtgtaaaaggagtattggaggtgtgaatagcatactggagcctgggaatcaaaaaatg
aatttaactgaagaaagtcaagctggttacaagattgattctggtacacatgcaatgtca
cttgcagcggacaggttatcacatcaaggtgcagcagttgttcaattcattctccactca
tgcatgttggctggattaactgaaaattgtcaacccattttcagaatgatcagtgtcaag
aataagacagaagctaaaaaattcatcattgaaaagcttcataaaaacttacaagattta
tccaaagctttgtcaagaaatgttgatgattgtgtgctaattctaatgaggattttacta
agaatcatcaataagggtgcagttgcgtaccctcaaaactggtcaacaattgaaagtcgt
cgtgaatgggaaaaagtatttcaaaatgaatatctgttgcctgtgtttcaagatattgat
acacaaatacaagatgcaaaacaattaatgaaacaagctgaagatgatgaaagagaacca
ctgaacagactcttgaatgatgttaactctgatgatgaaattgaaaaacgctttgattgg
aaacattgtttcttctggaattattttagtcaaccaacccctgaacacctattacaagtt
ttgtctgacaagactgaaaagggtcatggtgaagttttgaaattgattcttcaaacacca
gatatttatctacttatgcatttggaagatattctgaaattacaacatgttatgattgag
aggtataaatacaatatcgatatgcaagaagcagaccaaagaacctttgaagatcatgta
catcaagatggatttgatgatgaagccttaattgaaaaatatattattgcatggaatttt
atctgccctcaattacaggattttgctccaagcttgttgaaaaactactttgtaccaatt
acaaaacagagctctttatctgtcgctcttcctagtatgcgtggtcgtggacaatgtgca
aaattacttgctgaatatttaattgagattcagaattcatttctttcaagctgtcacaga
gctatgcgattagctgagagaaatgaatatgctgatgttctgcaacttgtttcaaatgat
tttatttgcaccaagaaacaagatctcttacttttaattaatgagcataccaaatatgat
attttgacgaatgaacaagaaaaacaacatttgatgtcttacaatattgatgctttagaa
aaacaggttcaagaagaattcgttcgcggcaagaagctaattgataagaagacattacct
tgtatgagttatcctcaggatgttggaattggtgttgattggggtagagttgtagcaact
acaaatcagataccattgacagctaagctatctcaagatattgacagattagtttcaaaa
tgtcattcttctgagatatgtgaagtggttagaactttaacaaacgctatcacctttttg
tctaaggtgaaaataagatctgaaagaccgctctgtgattttcttgagaaagatctgaaa
atgatgtcagctcagacttctatgataccgagatccaccaatacctgccatgttctttct
ttgtatcaaaggttaacatggcacaaatcggtaatgttctctcatcgaggacttgatcca
tacaaagaaactttgtttactgtcaatcaagaggagattcccgattatatcagagaaaaa
gttgaagatacttttaaacaaatggatgttgtcatgctacaacaaagaatcaacgaaatg
ttgatcaactttccagaaagtaatgctgactggagcttggttgaagatttgtttccaaat
atccagtttattgatggaaatgaagacgatagttggtattcgaaattgccaaaggaatta
tgctgtaaacacatttctgatttattttctttgagtgtgaaatttttgttgagtaattga
DBGET
integrated database retrieval system
