Styela clava (leathery sea squirt): 120325825
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Entry
120325825 CDS
T07291
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03020
RNA polymerase
sclv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120325825
09124 Replication and repair
03420 Nucleotide excision repair
120325825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120325825
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120325825
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120325825
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120325825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
VirK
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
120325825
NCBI-ProteinID:
XP_039247922
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPPAFEAFLLFDGEKKIQITKDTKVPNAAHFTINKEDHTLGNLLRMQLLKDPKVLFAG
YKIPHPLESKFILRVQTTADYTPQEAFTNAITDLISEISLLEERFKVAVREKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccaccagcatttgaagcttttttactttttgatggagaaaagaaaatccaa
ataaccaaggacacgaaagtgccaaacgctgcacattttacaattaataaagaagatcac
acactgggaaatctgctcaggatgcaattgttaaaagatccgaaagtactcttcgctgga
tataaaatacctcatcctctcgaatcgaaattcattttgcgagtgcaaacaacagcagac
tacacaccacaagaagcattcactaatgctattacagatcttattagtgaaatttcatta
cttgaggaacgattcaaggttgcagtgagagaaaaacaagagggtattgaataa
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integrated database retrieval system
