Styela clava (leathery sea squirt): 120325913
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Entry
120325913 CDS
T07291
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00310
Lysine degradation
sclv00514
Other types of O-glycan biosynthesis
sclv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120325913
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120325913
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120325913
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120325913
Glycosyltransferases [BR:
sclv01003
]
O-Glycan biosynthesis
O-linked Gal type
120325913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120325913
NCBI-ProteinID:
XP_039248026
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MLEETTTYEEKARDRMFSAKNIKSKIGEKTILVAIFVRNKEHSLPYFLRGLEDLKYDKEL
MWLWIVSDHNRDNSTKQLEAWVEVFKDKYAKIEFEKPDLPVEYNGQRSDLDWTNDRYIRL
LKLRQFALNKARRIDVDFILYIDADNILMNPYTLNYLTEKSETIIAPMLNSNTDYSNFWG
KVNEQGHHVKNNLYKQIITRKQTGTFDVPFVHSTFMINLKNKDSGKVRFLPIPPCYDYKF
NDNMVFRYQCDFKGVHMYIDNSAFYGYLPEPQDNDEDLEDEIYNFLRMRMDVMTLPPIGV
GITIRKSIHVPDKAIITSLPVDHVFVINLERNRDRRLRINKSFAMHGINYTLFEAVDGKL
LNKSYMDSLGIKVLPGYKSPDGGADMTVGEIGCFLSHYFIWKKILKNKYESTIIFEDDVQ
FRPKFIQKFKNAMKKVENEKIPWDLIYLERIPIKKGEEEPVMLENESGPNLVQPVYSFWA
IAYMISYAGAKKLIDAEPLSKIIAVDVFLPVMYGKQPLSYINEYFLKKNLNALSFKPTIV
KQTHYYNNVNHVSDTANSKFVCDILD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagagacgacaacatacgaagagaaagcaagagatagaatgtttagtgctaaa
aacataaaatcaaagataggtgaaaaaacaatacttgttgctatatttgtacgaaataag
gaacattcgttgccatattttttacgaggccttgaagatttgaaatatgataaagaactg
atgtggctgtggattgtttctgaccataatcgagataactctacaaagcaactggaagcc
tgggtagaagttttcaaagacaaatatgcaaagattgaatttgagaaaccagatttacca
gttgaatacaacggacaaaggagcgatttagattggacaaatgatagatacattcgactg
cttaaactgaggcaatttgctttgaacaaagccagaaggattgatgtcgatttcatttta
tatattgatgctgataatattttaatgaatccatacactttgaattacctcactgaaaaa
tctgagaccatcattgcacctatgttgaattcaaataccgattattccaacttttggggt
aaggtgaacgaacagggacatcatgtaaagaataatctgtacaagcaaataataacacgt
aaacaaaccgggacttttgatgttccatttgtacattcaacattcatgataaatttaaaa
aataaagattctggaaaagttagatttctaccaattccaccctgttacgactacaaattt
aatgataatatggtttttcgttaccagtgtgatttcaaaggcgttcatatgtatattgat
aattccgccttttatgggtatttaccagaaccacaagataatgacgaagatctggaagat
gaaatttataattttttgagaatgagaatggatgtcatgacattgccaccaataggcgtt
ggaataacaatacgaaagtctatacacgttccggataaggcgattattacgagtcttccg
gttgatcatgtgtttgtaataaatttggagcgaaatcgcgatcgcagattacggataaat
aaaagcttcgcaatgcatggaattaattacacgttatttgaggctgttgatggaaaatta
ttaaacaaaagttatatggatagtctcggaatcaaagtacttccaggatataaaagccca
gatggtggtgctgatatgactgtgggtgaaattggctgttttttgagtcattatttcatt
tggaaaaagattttgaagaataaatacgaatctactattatttttgaagacgatgttcaa
ttcagaccaaaatttatacagaaatttaaaaatgctatgaaaaaagttgaaaatgagaaa
attccttgggatttgatttatttggaaagaattccaataaaaaaaggagaggaagaaccg
gtgatgttagaaaatgaaagtggtcctaacttggttcaaccagtatattctttctgggcc
atagcatacatgatatcttacgctggggcgaaaaaattaatcgatgccgaaccgttaagt
aaaattattgccgtggatgtgtttcttcctgttatgtatggaaaacagcctttatcttat
attaatgagtattttctaaaaaagaacctcaacgcgctttcatttaaaccgaccatcgta
aaacaaacacactactacaacaatgttaaccatgttagcgataccgcaaattccaaattc
gtctgtgatatcctggattag
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