Styela clava (leathery sea squirt): 120326209
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Entry
120326209 CDS
T07291
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120326209
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sclv01007
]
120326209
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120326209
Enzymes [BR:
sclv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120326209
Amino acid related enzymes [BR:
sclv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120326209
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120326209
Prokaryotic type
120326209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
HGTP_anticodon2
Motif
Other DBs
NCBI-GeneID:
120326209
NCBI-ProteinID:
XP_039248388
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MLRYSSFIINSINKFCGRKLHFSLKFSTPISSSEIINKMSNEKENVPISGDAVQTKPQKK
GKQKSNTNISKELDPWPEYINERMKLYSKLKEESDQELKEKQEKLSAEIKVTLPDGKVVE
GRSWITTPYIVAQGISQGLADSCIVAKVNGEVWDLDRQFEKDSSLELLKFDDDDAKAVYW
HSTAHVMGEAMERVLGGCLCYGPPIEQGFYYDMYLEDRQVSDKDDFPALENVMRSVLKEK
QEFERLEVKKEHLLEMFKYNPFKLRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIK
AFQLYKNSASYWEGKADAESLQRIYGISFPDKKEMKEWQKFQEEAKQRDHRKIGREQELF
FFHELSPGSCFFLPRGAHIYNTLIDFIKSEYRKRGFTEVVSPNIYNSKLWLTSGHWQHYQ
DNMFSFDVEKETFALKPMNCPGHCLMFSHRNRSWRELPMRYADFGVLHRNELSGALTGLT
RVRRFQQDDAHIFARHDQIKDEIKSSLDFLKAVYDSFGFTFKLFLSTRPEKYLGEIEMWN
FAEKQLEESLNESGYPWKLNPADGAFYGPKIDIQIMDALRRPHQCATIQLDFQLPQRFNL
TYVTGEGAEKTHPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMVLAVSSKFDEY
AVSVRNELHKSGFQADMEMDPGLTLNKKIRNAQLEQYNFILVVGEKEMTNKTVNIRTRDN
KVHGEHTLEHTINRLRELVVSKSPNAEDEFEPNHQAE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcttagatatagcagctttattattaattccataaataagttttgtggtcgcaaactt
catttcagcctaaaattcagcactcctatatcttcttcagaaattattaacaagatgtct
aatgaaaaagagaatgtgccaatttctggagatgctgtgcagaccaagccacagaaaaag
ggaaagcaaaagtcaaacaccaacattagtaaggaacttgatccatggccagaatacatc
aatgaaagaatgaaactatactcaaagctcaaagaggaatctgatcaagaattgaaagaa
aaacaagaaaaactgtcagcagaaattaaagtcacgctaccggatggaaaagtggtagaa
ggaaggtcatggatcactacaccttatattgtagcacaaggcataagtcaaggccttgca
gattcttgtattgtagcaaaagttaatggagaagtatgggatcttgacaggcaatttgaa
aaagattcatccctcgagcttttaaaatttgacgatgatgatgctaaagctgtttattgg
cattctacagctcatgttatgggtgaagcaatggagcgtgttttaggaggttgcttgtgc
tatggacctccaattgaacaaggtttttactatgatatgtatctggaggatcgacaagtt
tctgataaagatgactttccagcacttgaaaatgttatgcgttctgtattaaaagaaaaa
caagaatttgaaagattggaggttaaaaaagagcatttgctggagatgttcaaatacaac
cctttcaaattgcgtattctgaatgagaaagttaatacgccaactaccacagtatacaga
tgtggtcctttaattgatctttgtcgaggtcctcatgtcagacatactggaaaaatcaaa
gcattccagctttacaaaaattccgcatcatattgggaaggaaaagctgatgcagagtct
ttgcagagaatttatggtattagttttcctgacaagaaggagatgaaagagtggcaaaag
tttcaagaagaagcaaaacagagggatcacagaaagattggcagggaacaagaactattt
ttcttccatgaattgagtccaggatcatgtttctttcttcctcgtggagcacatatctat
aacactcttattgattttatcaagagtgagtatagaaaaagaggattcactgaggttgtt
tctccaaacatatacaattctaaattatggttaacctccggacattggcagcattatcaa
gacaacatgttcagttttgatgtagagaaagaaacttttgcgcttaaaccaatgaattgt
ccaggacattgcttgatgttttctcatcgcaaccgatcttggagagaattaccaatgaga
tatgcagactttggtgtattgcatcgtaacgaattgtctggagcacttactggcttaact
cgagtccgacggtttcaacaggatgatgcccacatatttgctcgccatgaccagattaaa
gatgagatcaaaagtagcctggattttttaaaagctgtatatgattcatttggcttcact
ttcaagttgtttttatcaaccagaccagaaaaatatcttggtgagattgaaatgtggaat
tttgctgagaaacaattggaagaaagtttgaatgaatccggatatccatggaaactcaac
ccagctgatggcgctttctacggaccaaaaattgatattcaaattatggatgctttgcgc
agaccacaccagtgtgccacgattcaactcgacttccagctacctcaaagattcaatctg
acatatgtcacgggagaaggtgctgagaaaacgcatcctgtgataatccacagggcaata
ttgggttcggtggagcgtatgattgctattctgacagaaaattatggagggaagtggcca
ctttggctgtcgcccagacaagtcatggtcctggcagtctcttctaaatttgatgaatat
gcagttagtgtgagaaatgaattgcacaaaagtggttttcaggcagatatggaaatggat
cctggtttaacgctaaacaaaaagattagaaatgctcaacttgaacaatacaatttcatc
ttggttgttggggagaaggaaatgacaaacaaaactgtcaatatacgtactagagataac
aaagttcatggtgagcacactttagaacacaccatcaatcgtcttcgagaacttgttgta
tcgaaatctcctaatgctgaggacgaatttgaaccgaaccatcaagccgagtga
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