Styela clava (leathery sea squirt): 120326333
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Entry
120326333 CDS
T07291
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120326333
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120326333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
SAM_LFY
DUF2095
Zn_ribbon_tTFIIB
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
120326333
NCBI-ProteinID:
XP_039248535
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MPKTCPHCKCSELDVDPARGATVCMGCGTVLEENSIVSEVSFMENADGSSSMVGQFVSGE
GANKPHFAGLRHGISKESRQMTLDRGKREIREMASSLHLNQHCIDTAFNFFKMAINKRLS
RGRRIQHIVAACLYMTCRIVGTPHMLLDFSDITQVNVFTLGKAFLVLAKELHIHLPVLDP
CMYITRFAHRMDFGDKTNEVGVAAMRLVSRMKRDWIHTGRRPSGLCGAALLVAARLHGYS
CTLKDVVRVVRIGHDTIRKRLSEFVSTPSSQLTINEFMNIDLESEADPPAFTESRLKQKQ
ANLENFEEEIDQLSNAIDNEIENSLPKRLRTDTVPTPPSKTYESPLATQYPIEDPELQVA
ADFVHAENPEAVAKKLLITSKGTTQNPLSTQTASAATPGPAPSLSSLGLTQPAEDCFKVP
TLPWDKNQEEEEEQGELDLSNINDEEIDQMILSPNETIIKTRLWMAENGEYMQEMAIRAE
KRRREEEEREKTRPKKPKRKLVSKKDYYANSQSAGEAIEKLLQRQKLSSKINYDALKRVN
EEPSPQPVRTGPKFIDSFANLAKYDLTPKIEKLFEDEPQVVKIEETKPIVPRKKMKVAPC
LNPDAQDDLVKPEIITESGPVSAAYEVTVESGPVAVEEEGYEEYDDDEHCLSASQLMQEA
GVGDSGYGGFNYEGYDEYD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagacatgcccccattgcaagtgtagcgagctagatgtggaccctgctcgaggg
gccaccgtgtgtatgggatgtggcactgtcctcgaagaaaattcaattgtctccgaggtt
tcgtttatggaaaatgctgatggttcatcttctatggtcggtcaatttgtgtccggagaa
ggtgcaaataaacctcattttgcgggattacgacatggcatcagcaaggaatctaggcag
atgacattggacagaggaaagcgtgaaattagagaaatggcttcctctcttcatttgaat
caacattgcattgatactgcgttcaacttcttcaaaatggcaatcaataaacgtttgtct
cgaggaagaagaattcagcacatcgttgcagcttgcctgtacatgacttgcagaattgtg
gggactcctcatatgctgcttgacttcagtgatattactcaggtcaatgtctttactctg
ggaaaagcctttctagtactggccaaagagcttcacatacacctacctgtactggatcca
tgcatgtacatcacacgtttcgctcatcgaatggatttcggggataaaacaaatgaagtc
ggtgtggctgctatgagactagtatctcgaatgaagcgtgactggatacacactggtcga
agaccttcaggactatgtggcgccgcactactggttgcagcaagattacatggttattct
tgtacgctgaaagatgttgttagagtagtgagaattggacatgacacaatacgtaaaaga
ttatcagaatttgtttcaacaccatcaagtcaacttactatcaatgaattcatgaacatc
gaccttgaatcagaagccgatcctcctgccttcacagaatcgaggttgaaacaaaaacaa
gcaaatttagaaaattttgaagaggagattgatcaactgagcaatgcaatcgataatgaa
attgaaaactcattacctaaacgtttaagaacagacaccgtacccacacccccatctaaa
acctacgaatcaccattagcaacgcaatatccaatagaagatccagaattacaagttgct
gcagattttgttcatgctgaaaacccagaagctgtcgcaaaaaaactgttaatcacttcc
aagggaactacacaaaatccactttctacacaaactgcttcggccgccacaccgggtcca
gccccctcactgtcaagtcttggtttgacacaacctgctgaagattgttttaaagtcccg
acgctaccttgggataaaaaccaagaagaagaagaagaacaaggagaacttgatttaagt
aacataaatgatgaagaaatcgatcaaatgatattaagtccgaatgagacaataattaaa
acaagattatggatggcagagaatggtgaatatatgcaggaaatggcaattcgggccgag
aaacgaaggagagaggaagaagaacgagaaaaaacaagaccaaagaaaccaaaacgaaaa
cttgtgtctaaaaaagattattatgcaaattcacaatcagcaggagaagccattgaaaaa
cttttacaaagacagaaactttcgagtaaaataaactatgatgctttaaaacgagtaaat
gaggagccctcacctcaacctgtacgaacaggaccaaaatttatcgactctttcgcaaat
ctcgcaaaatacgatttgactccaaaaatagagaaattatttgaagacgaacctcaggtt
gttaaaattgaggaaacgaaaccaattgtgccgagaaagaaaatgaaagttgctccatgt
ttgaatcctgatgcccaagatgatcttgtgaaacctgagataataacagaatcaggacca
gtttctgcggcatacgaggtaactgtagaaagtggtcccgttgctgtcgaagaagaagga
tatgaggaatatgatgatgatgaacattgcctcagtgcttcacagcttatgcaggaagct
ggtgttggggactctggatatggcggctttaactatgaaggctatgatgaatatgactga
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