Styela clava (leathery sea squirt): 120326346
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Entry
120326346 CDS
T07291
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120326346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120326346
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
120326346
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120326346
Prokaryotic type
120326346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
120326346
NCBI-ProteinID:
XP_039248551
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MNSMVAYFHMRLMMDKYHARFMESIYDTRFMMEKDHMRLMLEIYKLRLMLENYHMCFMES
PYNMRFMIEHYQMRFMIEHRHMLLMMSNYHMCRMMKKLEMSNYHLRLMVENYQNPSMMPE
YTDLRFRYLSTVEESWKPVLASELYEQYFINLCDFLTKEKEEFGNTIYPPEEEVFAWTQY
CGIQHVKVVIIGQDPYHEEGEAHGLSFSVKDLQTLPPSLTKIYKELKTNIRGFEPPNHGD
LTSWAKQGVLLLNSCLTVRDGEAGSHKNKGWEVFTDAVIRHLNDNYSGIVFMLWGVPAQM
KKCFINEKKHLVLCCGHPVYNPRANSDSVPFKGCKHFLQANEYLFKHSIDGGINWTLPPV
PLERLGQSMLQDTFVQPGSLETQFSHMSINPAFSGIF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaattctatggtggcgtattttcatatgcgtctcatgatggacaagtatcatgcgcgt
tttatggagtcgatttatgatacgcgttttatgatggagaaggatcatatgcgtcttatg
ttggagatatataaattgcgtcttatgttggagaattatcatatgtgttttatggagtcg
ccttataatatgcgttttatgatagagcattatcaaatgcgttttatgatagagcatcgt
catatgctccttatgatgtcgaattatcatatgtgtcgtatgatgaagaagcttgagatg
tccaattatcatttgcgtcttatggtggagaattatcaaaatccttctatgatgccggag
tatactgatttacgatttagatatttgagtactgtcgaagagtcatggaaaccagtattg
gcatcagagttatatgagcagtatttcattaacttgtgtgatttcttaacaaaagagaaa
gaggaatttggaaatacaatttatcctcccgaggaagaagtattcgcttggacacaatac
tgcggtatacaacatgtcaaggttgttattattggtcaggatccttatcatgaagaaggt
gaagcgcacggactgagttttagtgtaaaagatcttcagacactaccaccatcactaaca
aagatctataaagaattgaaaactaatattcgaggatttgaaccgcccaaccatggtgat
ttaacttcatgggcaaaacaaggtgttttgctcttgaactcatgtctgacggttcgagat
ggagaagcaggatcacacaaaaataaaggatgggaggtatttactgatgctgtaattcga
catttgaatgataattacagcggaattgtattcatgctctggggtgtcccagctcaaatg
aagaaatgtttcataaatgagaaaaaacatcttgtattgtgttgtggccaccctgtgtat
aatccccgcgctaattctgattccgttccttttaaaggttgtaaacattttctgcaagct
aacgaatatttattcaagcatagcattgatggagggattaattggacactaccacctgtc
ccacttgagagacttggtcaatctatgcttcaggacacatttgtgcaacctggctcactt
gagacacagttttctcacatgtcaattaatccggctttttccggaatattctga
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