Styela clava (leathery sea squirt): 120326463
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Entry
120326463 CDS
T07291
Name
(RefSeq) cartilage intermediate layer protein 1-like isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
120326463
Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120326463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
SUEL_Lectin
CUB
Mucin2_WxxW
CILP_5th
Sushi
CILP
CUB_M02D8_5_3rd
CarbopepD_reg_2
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
120326463
NCBI-ProteinID:
XP_039248697
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MRVILLFALLAILVDSSYSRSQEIIACQGDELEIACENNNTVIYIEDAFYGRKNMSVCAD
PNSELNQVHCIASKSLPRVFSKCHMKKSCTIEATNEMFEVDPCPRLRNYLQIQYRCAERG
TDILGECPFEFWYRWMNGDSPSGTGDYETFYRHKHELPKWCESPDAVQIQLADGSPIHTR
NDVIKTGAQYGISCSNVHQDGSTCGDYKARFCCSSDCAIEIAEGNEGTISSPNYPDKYEP
NTDCSWMFKTSYDRYFLFTITNLQLEYRNKCVFDHLSITDLLTRKEVFHDCKLTGNSSVI
EVSGNRAQIRFITDRDNEGQGFQINWKTVKVPVCTPPSAPLSGGFDPIEQALWRVGTVVV
YRCDEYFLMEGQAIVQCKANRKWSHPRPLCKAECAPVPNDYFQRMPDFCTKADGSPKFVN
VGKCSKNKCKSKKKIGLDKANCCEAVETETTNVDCGSFYVPITKTIRCECGECVEDELII
SGIVAGGNNEEAVINGSVKYLDEVVATTDESGQFLFSLKTSKTKISLTFLDYSTRKFLPK
TQIIEISPGQQKFVKVQMKKKPPVVYLKSNVESKIDLKSGSPDDYEENIQPLVGEVVIAP
GSIKDGNGNVYEGEVEMYAHLVDNGNPESWKEAPGPFMAASNEDEDELEALENYGIFQFQ
INSPEHEPLEVENMEIKINVSHVEKEQLDKLGMYYFDNAKGVWQEDAPMLIYHDESARDE
KSTFLIGNINVTVDRIWSLNAVVNEYCYAKVRTYASSNFDHRDQMDGVSVRAVYMGDDGR
WKGFSSEMTMDGSGACIMVPCTGKSRELRLIHVTATDNDAKELWAVSSKPFRPKNAGFSK
YISNVLKYRRRDHDDRKLDKTSFNITIAKNFDSRDRWYGPIYASSSAERCFLAPPTDDHF
RFYKQTEGIRGKSAITTEYNAIPSDGDSEDPRYWGEYDNYNQVCFIKVATRGSRRILMRA
TSSGGIHPNVTGQLYGFRQKFVSGGEDMSSACIEFKCPRYFQDGILEQPLISLNSPDGNC
QLEDVNPLLQYYITFMNPDFEHSQIGDVSFKMMSPTSSLGSDFGIYVSKMASIDDAKSKA
LNQCSEGSTFQPHTKPFKHDAGIAITFNC
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttatacttctgttcgcactgctggctatacttgttgattcttcttattcgcgt
tctcaagagataatcgcttgccaaggtgacgaactggaaattgcatgtgaaaacaacaac
acagtaatttatattgaagacgcattttatggaagaaagaatatgagcgtatgtgcagat
ccaaatagtgaattgaatcaagtacattgcattgcatcgaaatcgttgcctcgggtgttt
tcaaaatgccatatgaaaaaatcttgcaccatcgaagcaacgaatgaaatgttcgaagtt
gatccgtgtcctagacttcgaaattatctacaaattcagtatcgatgtgccgaaagaggc
acagatatattaggagaatgtcctttcgagttttggtacagatggatgaatggtgattcg
ccatcaggaacaggagactacgaaacgttttatcgccacaaacatgagcttccgaaatgg
tgcgaaagtccagatgctgtacaaatccagctagctgacggaagtccgattcatactcgc
aatgatgttataaagactggtgcccaatatggtatatcatgctctaatgtgcaccaggat
ggatcaacatgtggggattacaaagcacgattctgttgttcttccgattgtgcgatagag
attgctgaaggtaatgaaggaacaatttcatcaccgaattatcccgataaatatgagcca
aataccgattgctcttggatgttcaaaacttcatatgatcgttatttcttatttacaatc
acaaatctccaacttgaatacaggaataaatgtgtgttcgaccacttaagtatcacagac
ctacttacgagaaaagaagtttttcatgattgcaaactaacgggtaattcgtctgtaata
gaagtatccggtaatcgtgctcagattcgatttataaccgacagggacaatgaaggacaa
ggattccagataaactggaaaacagtaaaagttccagtatgcactccgccttctgcaccc
ctttcgggaggtttcgatcctattgaacaagctttatggagagtaggaacagtggtggta
tatcggtgtgacgaatattttctcatggaaggacaagcaattgttcaatgtaaagcgaac
cgtaaatggtctcatccacgcccattgtgcaaagctgagtgtgcaccagttcccaacgac
tattttcaaaggatgccagatttttgtacgaaggctgacggatcaccgaagtttgttaac
gttggaaaatgttccaagaacaaatgtaaaagcaaaaagaaaataggtttggacaaagcg
aattgctgcgaagccgtcgaaactgaaactacaaatgttgactgtggatcattttacgtt
cctatcacaaagaccatccgatgcgaatgcggtgaatgtgttgaagatgaattgataatt
agtggaattgttgctggcggaaacaacgaggaggctgtaataaacggatctgtgaaatat
cttgatgaagtagttgcaactacagatgagtcagggcaatttctgttttcattgaaaaca
tcaaaaacaaagatttctttaacgtttttggattattcaactcgaaaatttttacctaag
actcagattatagaaatatcccctggtcaacaaaaatttgtcaaagtacaaatgaagaaa
aaacctccagtagtatatttgaaatctaatgtagaatcgaaaatagatcttaaatctgga
tcaccagacgattatgaagaaaatattcaaccgttggtgggagaagtggtaattgcaccg
ggttctataaaagatggaaatggaaatgtttacgaaggagaggtcgaaatgtacgctcat
ttagtcgataatggaaatcctgaatcttggaaagaagcaccaggtcccttcatggcggca
tcaaacgaggacgaagatgaattggaagctttagaaaattatgggatttttcagtttcaa
atcaacagtcctgaacatgaaccattagaagttgaaaatatggaaataaagataaatgtg
tcacatgttgaaaaagagcaacttgataaattaggaatgtattatttcgataatgcaaaa
ggagtgtggcaagaggacgctccaatgttgatttatcacgatgaaagtgccagagatgaa
aagtccacatttttgatcggaaacattaacgtgacggtcgacagaatttggagtttaaat
gcagtagtgaatgaatattgctacgccaaagttcgaacatatgcatcgtcaaattttgac
caccgtgatcaaatggacggagtgtcagttcgtgctgtatacatgggagatgatggcaga
tggaaaggattttcatccgaaatgacaatggacggaagtggagcctgcatcatggtacca
tgtactgggaaatcacgcgaattgcgcctcatccatgttactgctacggataatgatgct
aaagaattatgggctgtttcttccaaacccttcagaccaaaaaacgcaggattcagtaaa
tacatcagcaacgtcctaaaatatagacgacgtgatcacgatgataggaagctagataaa
acatcttttaatatcacaatagcaaaaaactttgattccagggatcgttggtacgggcca
atatacgcgtcatcatcagccgagagatgctttctagcgccacctactgatgaccatttc
aggttttataaacaaactgaagggattcgaggaaagtccgctataactacagagtataat
gcgataccttctgatggtgattctgaagatccaagatattggggagaatatgataattat
aatcaagtgtgcttcatcaaggtagccacccgtggttcgcggagaatactaatgcgagca
acaagcagtggaggtatacatcctaacgtaaccgggcagttatacggctttcgtcaaaaa
tttgtaagtggtggggaggatatgtcatcagcatgtattgaatttaaatgtccgagatat
tttcaagacggaattttggaacaaccgctgatttcacttaacagtcccgatggaaattgc
cagcttgaagatgttaaccctctacttcaatattacattacatttatgaatccagatttt
gaacattcccaaataggagatgtcagttttaaaatgatgtctcccactagttcattggga
tctgactttggaatttatgtttcgaaaatggcaagtatagacgacgcaaaatcgaaggcg
ctgaaccagtgcagtgaaggatcaactttccaaccgcatacaaaaccattcaaacatgat
gcaggaatagcaataacttttaattgttag
DBGET
integrated database retrieval system
