Styela clava (leathery sea squirt): 120326659
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Entry
120326659 CDS
T07291
Name
(RefSeq) sodium-dependent serotonin transporter-like isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120326659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120326659
Transporters [BR:
sclv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120326659
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120326659
NCBI-ProteinID:
XP_039248913
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MSGNVNEHYEGDETCSGRIWDVSFVTEQSGRSLFDTDLASDFTIAKMSGCDITNEISKPS
ETADNQLLEDCDGIIVRANWTENLQTKNDGTVQSRDSITNRRLSDEMSVRRSSSSYGLVL
VQRTSREKWSRKIDFLLSVVGFAVDLGNVWRFPYICYKNGGGAFLIPYLLMIMLGGVPLF
YLELALGQYHRNGCISIWRRICPILKGLGYAICLMALYVSSYYNTVIAWAVFYLYSSFTS
ELPWSHCGHEWNDNTTCVDKIDAAAHNQSWSNTSQSPSQQFFERHVLELHKSTGLDDLGA
PKMEIVFCLLIVYVIVYFSLWKGVKSSGKVVWFTATFPYVVLLILLVRGATLPGASKGIE
FYLKPNWETLADPVVWLQAATQVFFSLGPGFGTLLALSSYNDFHNNCYRDALITSTINCL
TSFLAGFVVFSVLGYMAHLLNKEDISDVTTPGVGLLFVVFSQALTQFSGSVFFSIMFFLM
IITLGLDSTFGGLEAVITGFSDEFPKTIGKHRELFVLGLLVASFTLSLSTTTYGGIYMVT
LMETYATGTAIMIVVLLEAIAVSWFYGIDRVSHDIRAMIGSPPGMYWKICWKYVSPVFLS
FMIIMSFIFIPPLEYGSYEFPNWSTGVGWAITVSSVILVPTYAIYRSVKKCYTKRRISQK
QKNIEDKISHESDCL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaacgtcaatgagcattatgaaggcgacgaaacctgttctggacgcatttgg
gacgtcagctttgtgacagaacaatctggtcgttcattatttgacaccgaccttgcttct
gacttcaccattgctaaaatgtctggttgtgacataacaaatgaaatcagtaaaccgtct
gaaacagctgacaatcaattgttagaagattgtgacggaataattgttcgtgctaattgg
acggagaacttgcagacaaaaaatgacggaactgtacaatcccgtgacagcatcacaaac
cgacgattaagcgacgaaatgagtgttcgaagatccagctccagctacggactagtactg
gttcaaaggacaagtcgagagaaatggtcccggaagattgattttcttctcagtgtcgtt
ggattcgccgtcgacctcggaaatgtttggaggtttccatatatctgctacaagaatggt
ggaggggcgttcctgatcccttatctactgatgatcatgttaggcggtgttcctctcttc
tatctggaattagctctcggtcaatatcataggaatggatgcatctcgatatggaggagg
atttgcccgatattgaaaggtctaggatatgcgatttgtttgatggctttgtacgtctca
agttactacaacaccgtcatagcgtgggccgtgttctacttgtatagttcgtttacgtct
gagcttccttggagccattgtggccatgaatggaacgataataccacttgtgtcgacaaa
atagacgccgcagcacacaaccaatcatggagcaacacgtcacaatcaccgtcacaacaa
tttttcgagcgtcacgtcctcgagcttcacaaatccaccggccttgacgatctgggggcg
cccaagatggagattgtgttttgtcttctgattgtttacgtcatagtctatttcagcttg
tggaaaggagtgaaatcttcgggaaaggtcgtctggttcacggcaaccttcccatatgta
gtgttgctaatcctacttgtacgaggcgcaaccctaccaggggcgagcaagggaatcgag
ttttatctgaaaccaaactgggagacactggctgatcctgtagtttggctgcaagctgca
actcaagttttcttctcactcgggccaggattcggaaccctgctagccttatcgagttac
aacgacttccacaacaattgttatcgtgacgctctcattacaagcacaattaactgtctt
acaagtttcctggctggcttcgtcgttttctccgtccttggctacatggctcacttgctc
aataaagaggacataagtgacgtaacaactccaggtgtcggactactatttgttgttttc
tcccaagctctcacccaattcagtggatccgttttcttctcaatcatgttctttctgatg
atcataactctggggctagacagcacgtttggcggactggaagctgtcattactgggttc
tctgacgaattcccaaagacaattgggaaacatcgagagctgttcgtcctcggcttgtta
gttgcgagtttcactctctcgctgtctacaacgacatacggtggaatatacatggtcaca
ttgatggagacttatgctaccgggactgccattatgatcgttgtgttattggaagcgatt
gctgtcagctggttctatggtatcgacagggtcagccatgatatacgagctatgattggt
tctccgcccggaatgtattggaaaatatgctggaaatatgtcagccctgtgtttctatcg
ttcatgatcataatgagttttatcttcattcctccactggagtacggttcctatgagttc
cctaattggtcgacaggagtgggatgggccatcacggtatcatcggttattttagtaccc
acgtacgccatctaccggtcagtaaaaaagtgttacacaaaaagaaggataagccagaaa
cagaagaacatagaagataaaatatctcatgaaagcgattgtttgtga
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