Styela clava (leathery sea squirt): 120326757
Help
Entry
120326757 CDS
T07291
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120326757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120326757
03041 Spliceosome [BR:
sclv03041
]
120326757
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120326757
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120326757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
120326757
NCBI-ProteinID:
XP_039249034
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MASYNEASEVHAEDSLHDLNMFSSITKEIQTIMQQISHLKSKTPDKGKEEINELRLTGSL
HFMTLKKLNRLAQIRCKNAKDSTLEAKQKLDANNLRLQNLQYEISHLDREVNNCLQFKSK
HEDIDLVSVNEFYTEAPPTISKENETRTDNHLQTLARLDWELENRKTLKEELTQAHEKKD
KICEGIKKRKQDLDSLKPNLETILKSTMPLQEALGDHFTETRALYDTAYLLPQPLYVLFV
QAKAFSDACDRNMDVQIGGDVNVAKRLKDLETRKVVDATNLYKNRYEDDSDSENEDDQEN
KRGRRKSTSTKAASSEVMNIDSSISKHPLFVSLKIYLESKTANSSYLLMRFYSYDSEFVT
VIPSLELCSSLNEIKKSRVIAASSLLNDLQLVDNGTSIPHKATGTGKHSTGISFSENEFG
YVWAQKLAGLVALQDGEVISRQSGFSTMHLIIKLIRKRIESRLSLANQLNDYSNNVVTCD
PSFRENFAPVVLFKLSSWKCIDFHDYSQMEFTSAARELDLVSKNDYFYCGTLQRGTSANI
KVAVAVSDKYPTKWPLFRIQVCWHGNHTAENNLNVREIEVEVNCKMPQIVMKSRKKLQNE
LLSVQLYRLLTLLDIYVETDCNMDGSDMPSEFPTSKLCPRMSKGRARLKPFKYNARHKFQ
CY
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctataacgaagcatctgaagtacacgctgaagattccctccatgatctcaat
atgttttcatcaatcacaaaggaaatacagacaatcatgcaacaaatttcacatctcaaa
tcgaaaacgcctgacaaagggaaagaggaaatcaacgaactacgtctcactggttcactc
cattttatgacgctgaaaaaactcaatcgacttgcacaaattagatgtaaaaatgccaaa
gattccacgctggaagcaaagcaaaaattagatgcaaataatctacgtttgcagaatttg
caatatgaaataagccatcttgacagggaggttaataattgtttacaattcaagtcaaaa
catgaagatattgatttggtttcagtcaatgagttttatactgaagcgcctccgacaata
tccaaagaaaatgagaccagaacagataatcatttacaaactctagcacgactggattgg
gaattggaaaatcgcaaaacattgaaagaggaactgacacaagcacatgaaaagaaagac
aaaatatgcgaaggaataaagaaacgcaaacaagatttagacagcttaaaaccaaatttg
gaaacgatcttaaaaagcacaatgccattgcaggaagcactaggtgatcattttactgaa
acaagggcactttatgacacagcatatcttcttcctcagcctttgtacgtgctatttgtg
caagcgaaagcattttccgacgcatgtgacagaaacatggatgtacagatcggaggggat
gtcaatgttgcaaaaagattgaaagatctggaaacaagaaaagttgttgatgcaactaat
ttatataagaatcgatatgaagatgatagcgattctgaaaatgaggatgatcaggaaaat
aagagaggaagaaggaagagtacatctacaaaagcagcatcgagtgaagtgatgaacatt
gacagttcaatctccaaacatccgctctttgtttcgctcaaaatttacctcgaatcgaag
actgcaaattcttcctatttgttgatgagattttacagctatgattctgagtttgttact
gttattccatccctagaattgtgtagctcattgaatgaaatcaagaaatctcgtgtcata
gctgcatcgtcccttctgaatgatcttcaactagttgataatggtacatctatacctcat
aaagcaacaggtactggaaaacacagtactggaatttcattctcagaaaatgagtttggt
tatgtctgggcgcaaaagttagcaggtttggttgcattgcaggatggtgaagtaataagt
agacaatccggtttttctacaatgcatcttatcataaagctaattaggaaacggatagaa
tctcgtctctcactagcaaatcaactcaatgattattcaaacaacgttgtaacatgtgat
ccaagtttccgagaaaattttgcacctgttgttctgttcaagctatcttcatggaagtgc
atcgattttcatgattattctcaaatggaatttacttctgcagcaagagagcttgattta
gtgtcgaaaaatgattacttctactgcggaactttgcaaagaggtacgagcgcgaatata
aaagtagcagttgctgtgtccgacaaatatccaacgaaatggccactgttcagaatccaa
gtctgttggcatggcaaccacacagccgaaaataacctcaatgtgagagagatagaagtt
gaagtgaactgcaaaatgccacagatcgtcatgaaatccagaaagaaattgcagaacgag
ttattgtcagtgcagttatacaggctgttaactctgcttgatatatatgttgaaacggac
tgcaacatggacggtagcgacatgccatctgaatttccaaccagtaaactatgtccacgg
atgtcaaaaggaagggcacgcctgaaacctttcaaatacaatgcgagacacaaatttcaa
tgctactaa
DBGET
integrated database retrieval system