KEGG   Styela clava (leathery sea squirt): 120326757
Entry
120326757         CDS       T07291                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120326757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sclv03019]
    120326757
   03041 Spliceosome [BR:sclv03041]
    120326757
Messenger RNA biogenesis [BR:sclv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     120326757
Spliceosome [BR:sclv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    120326757
SSDB
Motif
Pfam: FmiP_Thoc5 RWD
Other DBs
NCBI-GeneID: 120326757
NCBI-ProteinID: XP_039249034
LinkDB
Position
Unknown
AA seq 662 aa
MASYNEASEVHAEDSLHDLNMFSSITKEIQTIMQQISHLKSKTPDKGKEEINELRLTGSL
HFMTLKKLNRLAQIRCKNAKDSTLEAKQKLDANNLRLQNLQYEISHLDREVNNCLQFKSK
HEDIDLVSVNEFYTEAPPTISKENETRTDNHLQTLARLDWELENRKTLKEELTQAHEKKD
KICEGIKKRKQDLDSLKPNLETILKSTMPLQEALGDHFTETRALYDTAYLLPQPLYVLFV
QAKAFSDACDRNMDVQIGGDVNVAKRLKDLETRKVVDATNLYKNRYEDDSDSENEDDQEN
KRGRRKSTSTKAASSEVMNIDSSISKHPLFVSLKIYLESKTANSSYLLMRFYSYDSEFVT
VIPSLELCSSLNEIKKSRVIAASSLLNDLQLVDNGTSIPHKATGTGKHSTGISFSENEFG
YVWAQKLAGLVALQDGEVISRQSGFSTMHLIIKLIRKRIESRLSLANQLNDYSNNVVTCD
PSFRENFAPVVLFKLSSWKCIDFHDYSQMEFTSAARELDLVSKNDYFYCGTLQRGTSANI
KVAVAVSDKYPTKWPLFRIQVCWHGNHTAENNLNVREIEVEVNCKMPQIVMKSRKKLQNE
LLSVQLYRLLTLLDIYVETDCNMDGSDMPSEFPTSKLCPRMSKGRARLKPFKYNARHKFQ
CY
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcgagctataacgaagcatctgaagtacacgctgaagattccctccatgatctcaat
atgttttcatcaatcacaaaggaaatacagacaatcatgcaacaaatttcacatctcaaa
tcgaaaacgcctgacaaagggaaagaggaaatcaacgaactacgtctcactggttcactc
cattttatgacgctgaaaaaactcaatcgacttgcacaaattagatgtaaaaatgccaaa
gattccacgctggaagcaaagcaaaaattagatgcaaataatctacgtttgcagaatttg
caatatgaaataagccatcttgacagggaggttaataattgtttacaattcaagtcaaaa
catgaagatattgatttggtttcagtcaatgagttttatactgaagcgcctccgacaata
tccaaagaaaatgagaccagaacagataatcatttacaaactctagcacgactggattgg
gaattggaaaatcgcaaaacattgaaagaggaactgacacaagcacatgaaaagaaagac
aaaatatgcgaaggaataaagaaacgcaaacaagatttagacagcttaaaaccaaatttg
gaaacgatcttaaaaagcacaatgccattgcaggaagcactaggtgatcattttactgaa
acaagggcactttatgacacagcatatcttcttcctcagcctttgtacgtgctatttgtg
caagcgaaagcattttccgacgcatgtgacagaaacatggatgtacagatcggaggggat
gtcaatgttgcaaaaagattgaaagatctggaaacaagaaaagttgttgatgcaactaat
ttatataagaatcgatatgaagatgatagcgattctgaaaatgaggatgatcaggaaaat
aagagaggaagaaggaagagtacatctacaaaagcagcatcgagtgaagtgatgaacatt
gacagttcaatctccaaacatccgctctttgtttcgctcaaaatttacctcgaatcgaag
actgcaaattcttcctatttgttgatgagattttacagctatgattctgagtttgttact
gttattccatccctagaattgtgtagctcattgaatgaaatcaagaaatctcgtgtcata
gctgcatcgtcccttctgaatgatcttcaactagttgataatggtacatctatacctcat
aaagcaacaggtactggaaaacacagtactggaatttcattctcagaaaatgagtttggt
tatgtctgggcgcaaaagttagcaggtttggttgcattgcaggatggtgaagtaataagt
agacaatccggtttttctacaatgcatcttatcataaagctaattaggaaacggatagaa
tctcgtctctcactagcaaatcaactcaatgattattcaaacaacgttgtaacatgtgat
ccaagtttccgagaaaattttgcacctgttgttctgttcaagctatcttcatggaagtgc
atcgattttcatgattattctcaaatggaatttacttctgcagcaagagagcttgattta
gtgtcgaaaaatgattacttctactgcggaactttgcaaagaggtacgagcgcgaatata
aaagtagcagttgctgtgtccgacaaatatccaacgaaatggccactgttcagaatccaa
gtctgttggcatggcaaccacacagccgaaaataacctcaatgtgagagagatagaagtt
gaagtgaactgcaaaatgccacagatcgtcatgaaatccagaaagaaattgcagaacgag
ttattgtcagtgcagttatacaggctgttaactctgcttgatatatatgttgaaacggac
tgcaacatggacggtagcgacatgccatctgaatttccaaccagtaaactatgtccacgg
atgtcaaaaggaagggcacgcctgaaacctttcaaatacaatgcgagacacaaatttcaa
tgctactaa

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