Styela clava (leathery sea squirt): 120326946
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Entry
120326946 CDS
T07291
Name
(RefSeq) DDB1- and CUL4-associated factor 5-like
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120326946
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120326946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_WDR35_TULP_N
MPI_cupin_dom
Motif
Other DBs
NCBI-GeneID:
120326946
NCBI-ProteinID:
XP_039249234
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MERHPTIYLKNLQISGNTRASCLFHRKRLEDFESMYVQNLNAHYGCINALEFSNEDGNFL
ASGGDDKRVVLWNLTLAMLKPNYQPVVMHATHLSNIFCLTFNMTDDKLISSGNDGQVILH
DLHTNNLVDVFMCDNSVYGLSSSPSNEHLVAAACEDGTVHIIDTRLTKADGLCLARRSSA
FHSVMFSPVDHHLIATSHSRDGMALWDIRSPKKEVLHYGQKGSKQRAMSARFNKTGNQLL
CLRRRQCLALYNISDSKSIAEFDCDGYSNYCTMKSCCFAGDKDQYIVSGSDDFGVYMWKL
PGEYEEKRQHVGNAFKVLRGHRSIVNQVRFNRHSNLLVSCGVEKMVKLWSTERLPMGGGD
VFPSCEKPRKRYSHNEYIQLIFESSGMVHDYHAEDMEEDPKMLAFFDSLVQHEADDRTSD
SSNCDSSVAIQLNDYFITHEENTTNSESLTSDDGGPASLDTLGIGDATTNKSAAQKASQK
KLRRLREKVKEDSDWRVQDFEEKSSSELPRTSCSNSDEKLEDDQPTTSTSVSSAKVISPV
KTKRRRKERESVKACSSDTSDSENEAARTRQRNAHRRVRRPFRISQSSDNGSPSTSGLCS
STFSSNNIDPHSNGQS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaacgccatcccactatttatctcaaaaacctccaaatttctggaaatactcgtgca
agttgtcttttccacaggaaaagacttgaagactttgagtcgatgtatgttcaaaatttg
aatgctcattatggatgtatcaatgctcttgaattctctaatgaagatggaaattttctt
gcatcaggtggagatgataaaagagttgtactttggaacctgacacttgcaatgttaaaa
ccgaactatcaacctgtggtaatgcatgcgactcatctttccaacattttctgtttaaca
ttcaatatgacagatgacaaattgatatcttcgggtaatgatggtcaggtaattcttcac
gacttgcacacaaataatctggtggatgttttcatgtgtgacaactctgtgtatggatta
tcttctagtccaagtaatgaacatttggttgctgcagcttgtgaagatggcacagttcac
attattgacaccaggcttacaaaagcagatggactttgtttggcacggagatcatcagct
tttcatagtgttatgtttagtccagtagatcatcatttgattgcaacatcacattccaga
gatggaatggcattatgggatataagaagcccaaaaaaggaagtgctgcattatggacaa
aaaggttcaaaacaaagagccatgagtgcaagattcaacaagactgggaaccaattactt
tgtctccgacgtcgacaatgtcttgccttgtataatatcagtgatagtaaaagtattgct
gaatttgattgtgatggatattcaaattactgtacaatgaaaagttgctgttttgctggt
gacaaagatcagtatattgtatctggatctgatgacttcggtgtttacatgtggaaattg
cctggagaatatgaagaaaaacgtcaacatgttggcaatgctttcaaggtcctaagagga
caccggtctattgttaatcaagtaaggttcaacagacattcaaatcttcttgtatcctgt
ggtgttgaaaaaatggtcaagttatggagtacagagcgtttacctatgggtggtggtgat
gtttttccaagctgtgaaaaacctcgaaaacgatactctcacaatgaatacatccagctt
atatttgaaagttccggaatggtacatgattatcatgctgaagatatggaggaagatccc
aaaatgctggcattttttgatagtcttgttcaacatgaagctgacgataggacttccgat
tcatcaaactgtgattcatcagtggcaattcagttgaatgattacttcatcactcatgaa
gaaaatacgaccaattcagagagtttgacgagcgatgatggaggacctgcaagtcttgat
actttgggaataggtgatgcaacaactaataaatcagctgcgcaaaaagcatcgcaaaag
aagcttcggagattacgagaaaaggtgaaggaggatagtgattggcgggtacaagacttt
gaagagaagtccagttctgaacttcctcgaacatcttgtagtaactctgacgaaaaactt
gaagatgaccaacctaccacttcgacatcagtgtcgagcgcgaaagtaatttctccagta
aagaccaaacgtaggagaaaagagcgagagtctgtcaaagcgtgttcaagcgataccagt
gattctgaaaatgaagcagcacggactagacaaagaaatgcacacagacgtgtaagacgg
ccatttagaatatcacagtcgagtgataatggtagtcctagtacgagtggattatgttcg
agcacattttcatctaataacattgatccacattccaatggccaatcatga
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