Styela clava (leathery sea squirt): 120327034
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Entry
120327034 CDS
T07291
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120327034
Membrane trafficking [BR:
sclv04131
]
Protein recycling
Others
Retriever complex
120327034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mad3_BUB1_I
MLKL_N
Motif
Other DBs
NCBI-GeneID:
120327034
NCBI-ProteinID:
XP_039249347
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MQKAEYAWIPKKVDYELIDGKKNFRSRPVAFSEYHPLKPITVTESAGVKASSKRRKSDAS
STKSGAESVKSSSGSTRSSSSATKDFIDPLSAMAIIDPLSVATQSTPKNSEQVESSEADI
LEVSTNDEYGEGFEHWASKKLFILSNYTLDEKLSMQMISISKSGDKAVGRSFNSSSTTER
LQIRLNQLNDMEEGSVQELKTQSQQNFIDRMYDLGKNLRQSWESNQKVNALKIAIQCAKM
LSDVSVMQFYPSKFVLIADILQTFGQLVYGRILSMCAGMSADKIDLDKVSDNAKEICLNW
MMKIASIRELLPRILIEASILPCYNFLKKDECNSALVRLTNMAKGVGNPLVCVYVRTYLC
MIGVKYTPKFKGHLLSNFYYFISTYKQIHTTSVQNEIAHQKLDMSTYLSLYMPALEWILS
CIAHNAHESTLKDVLEKCAKTGNSLLILRCILASFKPDYVSARALDFSSIISQSDDSLFP
KDVVFTTLGNSVIECDPPEKDKQPLLADVWKYIVKLQDPSEYIACAAVWTEYAVKNFKKK
EVNTILGDILKHMVPDRAFEKHYSKLQDVVKRILTHMKSFSVVFAIERFLPFLDMFQKDD
VKLDICTCVAEFFIKGSDQSTSDPLVINGMMYICRAMHDSINSMSLESERRSVGNAICAV
IQKITFGRDFEQQLNFYVECRGSFRNLDSVLSALVHLVNTLSTTCTRIVKHKHTTKTASF
VRACAAFCFITIPSLSDVYARLQLYLVSGQAALISHCVTQADAMFCAAVTQILDAPSLIA
NTDGKNVSTQNIMASYITNFLSTLLTVPDHPEQGILYLLRGLMNVISATGASGGLLSMES
RISVYIKVLSLLSAYSQDRYLYRVEYVDSNEHLYSSDEKFLAEISSIGTTLLDELFAFLT
ASSQYKSNDRAAVASELFSTIIAFGNIEAPCMQKLAVTTWNLMIKTGGIDHKQLVKTISH
VKGKGGSYTKVASSLSLSSKV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagctgagtacgcttggattccaaagaaagttgattatgagctgatcgatggg
aaaaaaaatttcaggtcacgacctgttgcattctcagagtatcatcctctgaaaccaata
acagtaactgagtctgctggagtgaaagcttcctcaaaacgacgaaaaagtgatgctagt
agcacaaaatctggtgcagaaagtgtcaaatctagttctgggagcaccagatcatcatct
agtgcaacaaaggattttattgacccattgtccgctatggcaataattgatccattatct
gtagcaactcaaagcactcccaaaaattcggaacaagtggaaagctcagaagcagatata
cttgaagtctctaccaatgatgaatatggagaaggttttgagcattgggcatcaaaaaaa
ttatttattctgagtaactatacattggatgaaaagctatcaatgcagatgatttccatt
tcaaagagtggtgacaaggcagtcggtcgttcgtttaattcgtcttctactacagaaaga
ctccaaattcgattgaatcagcttaatgacatggaggaaggtagcgtgcaggaactaaaa
acacaatctcaacaaaactttatagatcgaatgtatgacttgggaaaaaatcttcgacaa
tcatgggaatctaatcagaaagtgaatgccctgaaaatagcaattcaatgtgcaaaaatg
ctgagcgacgtatcggttatgcagttctatcccagcaaatttgttctgattgcagatatt
ttacaaacctttggccagttggtatatggtcgtatcctttctatgtgtgcaggaatgtca
gcagataaaattgatctggataaagtgagtgataatgcaaaagagatttgtctcaattgg
atgatgaagattgcatccattagagagcttcttccaagaatccttattgaagctagtatc
ctgccttgctataattttctaaaaaaggatgaatgcaactcggcactcgttcggctcact
aatatggcaaaaggtgtgggtaatccattagtttgtgtttatgtaagaacgtatctatgc
atgattggtgttaaatataccccaaagttcaaaggtcacttactttccaacttctactac
tttatttcgacatacaagcaaattcataccacatctgtgcaaaatgaaattgcacatcag
aagttggacatgtcaacatatctctcattatatatgcctgcgttggagtggattttatcg
tgcattgcccataatgctcatgaaagcacactgaaagatgttttagaaaaatgtgcgaaa
acaggtaacagtcttcttattttaagatgcatccttgcctctttcaaacctgattatgta
tctgcgagagcgttagatttttcgtctattatctctcagtcagacgacagtctattccct
aaagatgttgttttcaccacactcggtaatagtgtgatagaatgtgacccgcctgagaag
gacaagcaaccacttcttgctgatgtttggaaatacattgttaaactgcaagaccccagt
gaatacattgcatgtgcagcagtttggaccgaatatgctgttaaaaattttaagaaaaag
gaagtgaacaccatccttggtgacatcttgaagcacatggtaccagatcgggcattcgag
aagcattactcaaagttgcaggatgttgttaagagaattctaacgcatatgaagtctttt
tcagtggtttttgcaatagaaaggttcctaccttttcttgacatgttccaaaaagatgat
gtcaagctggatatttgtacttgtgttgctgaattcttcattaaaggttctgatcagtct
acttcggatcctcttgtgataaatggcatgatgtatatttgcagagcaatgcacgattcc
attaattccatgagtctcgaaagtgagcgtagatcagtgggcaatgcaatatgtgccgtg
atccaaaaaataacatttggtagagattttgagcagcaactgaacttttatgtggaatgt
cgtggttcttttcgcaatttagactctgtcttgtcagctttggtgcatctggtcaataca
ctttctactacttgtactcgaattgtgaagcataaacatacaactaaaactgcatctttt
gtacgggcttgcgccgctttctgcttcattactattccttctctcagtgatgtatatgca
agattgcagctgtatttggtttctgggcaagctgctctaattagccattgtgtcactcaa
gctgatgctatgttctgtgctgctgtaactcaaattttagatgcaccttcgctcatcgca
aatacggatggaaaaaatgtttcaactcagaacatcatggcatcttatatcactaatttt
ttgtctacattattaacagtacctgatcacccagagcaaggcattctgtatttgttgcgt
gggttgatgaatgttatttctgctacaggagctagtggcggattacttagtatggaatct
agaatttctgtctacatcaaggtgctcagtttgctatctgcttatagccaagatcgatac
ttataccgtgttgagtatgttgattctaacgaacacttgtacagcagtgatgaaaaattt
ctagcagagatttcatcaattgggactacattgttggacgaactttttgcttttctaaca
gcatcttctcagtacaagtcaaacgacagagctgcagtggcatcagagttgttttccacc
attatagcttttggcaatattgaagccccttgcatgcagaaactagcagtaactacatgg
aatctcatgatcaaaacaggagggattgatcataagcaactggtaaaaaccatcagccac
gtgaaaggaaaaggagggtcgtataccaaagttgcaagctctttatctctttcatctaaa
gtttaa
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