Styela clava (leathery sea squirt): 120327052
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Entry
120327052 CDS
T07291
Name
(RefSeq) RNA-binding protein 26-like
KO
K13192
RNA-binding protein 26
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120327052
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120327052
03041 Spliceosome [BR:
sclv03041
]
120327052
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120327052
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120327052
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120327052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
DUF1804
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
120327052
NCBI-ProteinID:
XP_039249372
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MVIIEKLDSLRIWLVKRLTPMCDADPSALAKYVIALIKKDKTEEELRKLCEDQLEVFLQT
ETNAFVSDLFETLESKSYVENEKEETTPPSTTETQEIPGLGDIKEPKKATKRRLQRPSPI
RHRSRSPYDRRRRFKRSRSPRERRRRYRSHSGSPKKIRFSPKRRSPIRRSRSRSPYRRGR
RTRSLSSSRSRSSSRSPDSSRQRLTSSNDRIVKKKRCWDFEQKGFCILADNCPYDHGANP
VVVDDSAISSTGRPKITPITAPPPLVGPPPAPPIKPNVPPPMMPPFLPPPPPGFPVPPPG
LRPPIPPPMPPPPPGGGIRIPPPGLPPPPPRSQPPPGYNPEAPAMTYRPSIISNIAPPRI
PGIENNLPPNIVRMGNPPPNDGGFVKRTIYNNAPPGVQNTGVVNNFNNNTKLIIRKIPPL
LNNITKLNEHFSQFGAINNIQVRFENDPQCALVEYANVNSARAAKRDTGAVMNNRFIMVH
WFNPQASNGRGPSNQTQQRPSVKERLGILPNPSQLKYTAPVKDQKVAANESVVAEGTIFR
TISNPDAQSSASPSVPDTASSVPETPKDNSATRARVQQAQQATKEKLLARQKLVMLKKIE
LQKQKRELLQAQMQQQKLFLNKIKESKNMPPGEKLKLLESLKTLTASIDKLRTSLKGENI
RTPQTEVKEKQKLTQKELLDAELDLYNASSTGENTVNLKQKLNQLKMEASSLGLVNAYKG
YQPAQRGRGRGTYMHRAKAPRVFSASANLDRRPRELRITGFHDDEKDELVSHLARFGEIE
NFVFDEDGITCTVKFSSRAQAEMASQHGPIFKNRRLIVVWNSGSIPAPQPVPTQVTNVVD
SPGEPPAEEDEILVVPPNEEKEEEDDETDNVQVHIGDVTVNYPPVTEIEPEGDDDLEEDG
YIDELDEDALLAADFDEEGEELGEEDYESEIRSWRH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggtgataattgaaaagctagactcgttgagaatatggcttgtgaagcgactaacacca
atgtgcgacgcagacccaagcgctctcgcaaaatacgttatagcgttgatcaaaaaagat
aagaccgaagaagagcttcgaaaattatgcgaagaccagctcgaagtcttcttacaaact
gagacaaatgcttttgtgtcggatttatttgaaactttggaaagtaaaagttatgtcgaa
aatgaaaaagaagagactacgccgccgagcacaacggaaactcaagaaattcctggattg
ggtgatatcaaagaaccaaaaaaggcaacgaaacgaagattacaacgaccatctccgatt
cgacatcgctcacgaagtccatatgatcgtcgcagacgttttaaacgctcacgatcacca
cgagagagacgtcgacgttatcgtagtcactctggatctccaaaaaagattcgtttttca
ccgaagcggcgttcaccgattcggaggtcacgatcaaggtcaccatatcgtagaggtcgt
aggacaaggtcattgtcatcaagtcgttctagatcatcttcaagatcgccagactcttct
cgtcaacgtctgacttcgagcaacgatcgaattgtaaagaaaaaacgatgctgggatttt
gaacaaaaaggattctgtattttggccgacaactgtccttacgaccacggtgcaaaccct
gtggtagttgatgactctgcgatatcctcaactggccgaccgaaaattaccccaatcaca
gctccacctccacttgtcggtcctcctcctgccccgccgataaaaccaaatgtgccaccc
ccaatgatgcctccatttttgcccccaccaccgccagggtttcctgttcccccaccaggg
ctaagaccccccattccgccaccaatgcctcctccaccaccagggggaggtataagaatc
ccaccacccggattacctcccccacctccgagatcgcaaccccctccaggatacaaccca
gaagccccagcaatgacatatcggcctagtataatttctaatatagccccaccacgtata
cccggaatagagaataatttacctcccaatattgtcagaatggggaatccccctcccaac
gacggtggttttgttaaaagaacaatatacaataatgcaccacccggtgttcaaaacaca
ggggtcgtgaacaatttcaataacaatacgaaattgataatacgtaaaatacccccattg
ttaaacaatattaccaaattaaatgaacatttttcacagtttggggcgataaataacatt
caggttcgctttgaaaatgatccacagtgcgccctagtggaatacgcaaatgtgaacagt
gcacgagcagcaaaacgagataccggcgcagtaatgaataaccgttttattatggttcat
tggtttaacccccaagctagtaacggtcgtggtccatcgaaccaaactcaacagcgccct
tcggtgaaagagcgtcttggaatcttacccaacccgagtcaactcaaatacaccgctccg
gtaaaagatcagaaagtagctgcaaatgaatctgtagttgcagaagggacaatttttcgt
accatttccaacccagatgctcagagttctgcctcgccatcagtccccgatactgcctct
agtgtccctgaaactccgaaagataactcggcaactcgagccagagtacaacaagcacag
caagcgacaaaagagaaacttctagctcgtcaaaaactcgtcatgctgaaaaagatcgaa
ctacaaaaacaaaaacgcgagcttttacaggcccaaatgcagcagcaaaaactgttttta
aacaaaattaaagagtcgaaaaacatgccaccaggagaaaaattaaagcttcttgaatca
ttaaaaacactcactgcatctattgataagctgaggacatctttaaagggagagaacatt
cgaactccgcaaacggaggtaaaagaaaagcaaaaactaacacaaaaagaactccttgac
gctgaattggatttatacaacgcttcgtctacaggagaaaacacggtgaatctaaaacaa
aaattgaatcaattaaaaatggaagcgtcatctttaggtttggtaaatgcgtacaaaggc
tatcaacccgcacaaagaggacgtggtagaggcacgtatatgcaccgagcgaaagcccca
agagtttttagcgcgtctgcgaacctggatagacgaccaagggaactgagaataactggt
tttcatgacgacgaaaaagatgaattagtttctcatttagcgagattcggagaaattgaa
aattttgtttttgacgaggatggtatcacatgcactgttaaattcagctctcgtgctcag
gctgagatggcgtctcagcacggacctattttcaaaaaccgacgtctgattgtcgtatgg
aattctggttcgattcctgctccacaacctgttccaacccaagtgacgaatgtggtagat
tcaccaggggaacccccagccgaggaagatgaaatattggtggttcccccaaatgaagaa
aaagaggaggaagatgacgaaactgacaatgtccaagtccatattggcgatgtgacggtt
aactatccaccggtgaccgagatagaacctgagggagacgatgatttagaagaagacgga
tacatcgacgaattagacgaggatgctctcctcgctgcggatttcgacgaggagggggaa
gaacttggggaggaagattacgagagtgaaatacggtcatggagacattga
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