Styela clava (leathery sea squirt): 120327193
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Entry
120327193 CDS
T07291
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120327193
Spliceosome [BR:
sclv03041
]
Common components
Common spliceosomal components
General mRNP proteins
120327193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_7
RBD_DEAH11
Transformer
Presenilin
Motif
Other DBs
NCBI-GeneID:
120327193
NCBI-ProteinID:
XP_039249571
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MADDIDVEAMLEAPFRKDGENGDAVDRDRKKKESSRKRDRDRKHERSRSHKRSRSRKRSR
DRKHRSRSRDRSRERRERRRSRERRSRSQEKRRRSRSRERKRSRSPKREPVLPPSLIETN
DTPKERSPSPGDRDARTVFCMQLSQRIRPRDLEEFFSSVGVVRDVKLIADKHSKRSKGIA
YVEFKDHESIPLALGLSGQKVLGVPIIVQPSQSEKNKVVQATTQATVQKGNVGPMKLYVG
SLHQNITEDMLKGIFSPFGKIDQVQLVKDPDTGISRGYGFITFMEADCAKRALEQLNGFE
IAGKPMKVANVTDKADQQAAMALAAGQGGPSFLDNDAIERTGIDLGTTGRLQLMAKLAEG
TGLHVPSITQQALSMGQAMGLGLRGSVNVGTDGVDAAPAAPPIATTCFQLSNMFDPKTET
DPDWDSEIRSDVIEECGKHGNVLHVYVDKNSDGNVYVKCGTLDSAAKSVAALHGRYFAGK
MITAAYVPLVNYHALFPDSATTNTSLVPKT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacattgatgtggaagctatgcttgaagcaccgttccgaaaagatggagag
aatggtgacgctgtagatcgtgacaggaaaaaaaaagaatccagtaggaagagggatcgg
gatcgtaaacatgaaagaagcaggtcgcacaaacgtagcagatcaaggaaaagaagtcga
gatcgaaaacacagatctagatcaagagacaggagtagggaaaggagagaacgtaggcgt
tcgagagaaagaagaagtcgttcacaggaaaagcgacgacgttctcgctcacgtgaacgt
aagcgttccaggagcccaaaaagggagccagtccttccaccatctctgatagaaactaat
gacactcctaaggaaagatcaccaagtcctggggatcgagatgctcgaactgtattttgt
atgcagttgtctcaaagaatacgtccaagagacttggaagaattcttctcatctgttggt
gttgttcgggatgtgaaattgatagcagataaacattcaaaacggtcaaaaggtattgct
tatgtggagttcaaggatcatgagtctataccgttggcactgggactcagtgggcagaaa
gttctgggagtacctataattgttcaaccttcacagtctgagaagaacaaagtcgttcag
gctacaactcaggccactgtacagaaggggaatgttggtcctatgaaattgtatgtaggg
tcactccatcagaatatcacagaagacatgttgaaaggcattttctcgccatttggcaag
atcgatcaagttcaacttgtgaaagacccagacactggcatatctagaggttatggcttt
ataacttttatggaagcagattgtgccaaacgggctcttgagcaattaaatggattcgaa
attgctggcaaaccaatgaaggtggcgaacgtgacagataaagctgatcaacaagccgca
atggcacttgcagctgggcagggtggaccttcatttctggacaatgatgctattgaacgt
actggcatagatcttggaacaactgggagattacaactaatggccaaacttgcagaaggg
acaggtttgcatgtaccctccattacccagcaggcactttcaatgggtcaagctatggga
ctcggcttgcggggatccgtaaatgttggcacagatggggtggatgcagctcctgctgca
cctccaattgcaactacttgttttcagctgtccaatatgtttgatccaaagactgaaact
gaccctgattgggattcagaaattcgctctgatgttattgaagaatgtggcaagcatggc
aatgttttgcatgtgtatgttgataaaaattctgacggaaatgtatatgttaagtgtgga
acactggattccgctgcaaaatccgttgcagcgttgcatggaagatattttgcaggaaag
atgatcactgccgcctatgtccccctggttaattaccatgctctttttccagattctgca
actacaaacacttcacttgtaccgaagacttga
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