Styela clava (leathery sea squirt): 120327507
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Entry
120327507 CDS
T07291
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 homolog B-like
KO
K15516
fragile X mental retardation protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120327507
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120327507
Factors involved in mRNA localization
Other mRNA localization factors
120327507
mRNA cycle factors
Stress granule specific factors
120327507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_9
Tudor_FRX1
KH_1
Agenet
FXMRP1_C_core
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
120327507
NCBI-ProteinID:
XP_039249749
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDNRTVEVRGSNGAYYKAFLSDVGPTGILVTFENNWQPEKIIPFQEIRLAYDVESGIEFV
EGQEAEVHSRANDNEPCGWWHCRIKMSKGEFFVIEYQSCDPKYTEIVTKERLRPINSNQP
LSGNDIRKVSLDVPEDLQDFCTKYIDAHKEFERSIEAILVRYNSTKKQLDVIVSNSSAQR
RATIVSDLHFRSLRTKLQMLQRVEEASKQLEITQQRAESCVEKFTVGEDLVGLAIGTGGA
NIMAARKISGVLDIVLDEDTHTFSVYGETKEAVQQAREMLEFCEEEVIVPRPYVGKVIGK
KGATIQEMIDKSGVIRVRVVGDDENTEKEIEPGMVPFRFIGIRENIRNARALLEYHVAYL
RDLDHLRMEQLSINQRIRQLDGGSSALPSQSESDMEGSYRRPRYNPGRGRGRRRSGSDRE
GATTTNSEKSISDTGSETGGESITDSKGQIKSKELLNNGYSNRGKPQSQKPFHKKETSNP
NHNRFEALNGAGEGQDKVENGVAPAQNGTERGPQTNPNTGGKKRRNRNRNKKGKLDNLTN
GTMNGDAAQSTENNPKKEDSATTVTAK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggataaccgaactgtagaagtaaggggttccaacggtgcatattataaagcattttta
tctgatgtgggtcctactggcatacttgttacatttgagaacaattggcaacctgaaaag
attattccattccaagaaattcgcttggcatatgatgttgaaagtggaatcgagttcgtt
gaaggtcaagaggccgaagttcattcaagagcaaatgataatgaaccttgtggttggtgg
cattgtcggattaaaatgagcaagggagaatttttcgttattgaataccaatcgtgtgat
ccaaagtatactgaaattgtcacgaaagaacgtctcagacctatcaatagcaaccaaccc
ttatcaggtaatgatatcaggaaagtgtccctggatgtacctgaagatctgcaagacttt
tgtacaaaatacatagatgctcataaggaatttgaacgaagtattgaagcgattttagtt
cggtacaactccacaaagaaacaacttgatgttatcgtgtcaaattcatcagctcagcga
agagctacgattgtgtcagatctacatttccgaagtcttcgtaccaaattacaaatgctc
caaagagtcgaagaagcttcgaaacaattggaaataactcagcagcgtgcagaatcgtgt
gtggaaaaattcacagttggtgaagatttagttgggctagccatcggtacaggaggagcc
aatatcatggctgctagaaaaatttctggtgttttagatatcgttttagatgaggataca
cacacattttcagtgtatggtgaaaccaaagaagctgtgcaacaagcaagagaaatgttg
gaattttgtgaagaagaagttatcgttccaagaccgtatgtaggaaaagtgattggcaaa
aagggagctacaatccaagaaatgattgacaaatctggtgttatacgagtccgagttgtt
ggggacgatgagaacacagaaaaggaaattgaacctggaatggtaccatttcgatttatc
ggaatacgagaaaatatcagaaatgcaagagcacttttggaataccatgttgcataccta
agggaccttgaccatttacgaatggagcaattgagtattaatcagcgtatacgacagctt
gatggagggtcgagtgcacttccctctcagagtgaaagtgacatggagggaagttacaga
agacccaggtataatccaggccggggtagaggacgcagacgctctggtagcgatagagag
ggagccactactacaaattccgaaaagtcaatttcagacacaggatcagaaacaggtgga
gaatcgatcacagatagtaaagggcaaatcaaatcaaaggaactgttaaataatggatat
tcaaatcgaggaaagccgcaatcacagaaaccgtttcataagaaagaaacatccaatcca
aatcacaatcgctttgaagcactaaatggagctggagaaggccaagataaggttgaaaat
ggggtagcgccagcacaaaatggcacagaaagaggaccacaaaccaaccctaacactgga
ggcaagaagagacgaaatagaaaccggaataaaaagggaaaattggacaacctcaccaat
ggcacaatgaatggtgatgccgcacaaagtaccgaaaacaatcctaaaaaagaagatagt
gctacaacagtcacagctaaataa
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