Styela clava (leathery sea squirt): 120327524
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Entry
120327524 CDS
T07291
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120327524
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120327524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
120327524
NCBI-ProteinID:
XP_039249771
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MSIDSRLEKVFDDALKTDTIVNVFAGFVRLTPEDHDKRLRACLSQFQEMTREIAPEDCVS
GLLNFFHKQTVLRHINFVADMIKICLKDSILPTKTVLQRLIPHEMLKHNRRVHWCKTFEI
LKEYIHLIEYKGCRDILHLVLLKLKNVPTTSWSEMTEQMNAIIDVIEYLLDPEACLLPGY
LAVNEIRQYSGEDQPPGHWSLSGKVAEFVDRFRATATMVSTTGRSHLLPVVFHFSVPLTT
TWKLDHETLRFTTKGQLPYDKSLYQRQTKLLRYILEQPYSRDMVCHVLNLQKQQKQRCEA
LETELVDLVVSTMERTSEIENLDEKDDAYRIIHLQWQHLSSQVIYFVLLQFAVFPRMVEN
FYQKLSSRNVKNGRDHLMWVLLQFISGSIQKNPLSDFLPIIKLMNLLYSERQPLPEPDIT
KPFSTHKFAAICILMHLNRKAQSDNQQQENASSNSSSGSISTTSKTAQFQHCAIPVSLQK
HHEYLQRCLESKNNSLQDYAIALICNACSTTTELFNGPINSLVDSIYGDSTTTPLPGENC
VAFAKTTPLSMSLLDSLTVHTKMSLIHHIVVKVMNLAQNNSNVALSPAVVETYSRLLVYM
ETESLGVKGLISQVFPKVLQNNSLGILNTLLEMFSYRLHHIQPQYRIQLLTNLHRVAAEP
NTDHNQLQICVESTALRMITALSNADVKPQLSRFTSEPKQIISKESEELNRALVLTLARS
IHITGAETISGSWCNDILKAILEETPHRWASHTLKCFPRSLQIFYQHNQIECTNKETLKN
NVEDEYRKWGQVISKSAQPGNSNSNSNAAVSESDALAYFTMDGSPPFFLCLLWKILTLDR
KPSLVCHNILTVIGRRKLSTHVRTFSDFLVHEFSLDGGSHVKRYIPIVRDMILKYNLVFL
DQLILCLALRCNEGNEAQVAFFIIQYLLMKPDDFRARVHSFVQDTKSAEHWTLDDWHVKH
MNYHRKFPEKFYFEGLKSSATEGEEEEKSSDSSQQYLPVYFGNLTLRFLPVFDLVVHRFL
ELMPVTNSLETLLAHLGPLYKFHEQPITYLFNTLHYYEARLRDRHSLKKTLVSTIIGSMN
DTKPQNWALSEQYLNYAAQQDNWKPENNYFCMLVRRLVDTIDGKHPAPFPACDWRFNEFP
NAAAHALHVTCVELMALPMQPESVGLALMEVVLKMQSVIERKYVMMWTNAVALLLTTLPE
IYWKPLHTELVNVIQSPALNSSAVGMTEYPYYLLKFSDQHLSFSDHSCTRLLALTHVVWH
HMGIGQLSLVPQFLKEQVKPNVMTELQLLYVFHLIGPFLPRFQHERTRCMIDVAVVLYDM
LLQVSENCDDIRFMDEIADFLYHLKYMHIGIAINNQVEGIIDRLKPGMRKRLRFIIHTAS
AKEQFRSPSAPSSASHGDGT
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgatagtagacttgaaaaagttttcgacgacgcattgaagacagatacaata
gtgaatgtttttgctggatttgttcgtttaactccagaagatcatgacaaacggctccgt
gcatgcctttctcaatttcaagaaatgacccgagagattgcgcccgaagattgtgtgtct
ggtttgttgaattttttccataaacaaactgttttacgtcacataaattttgtagcggac
atgatcaaaatttgtttgaaggattcgatactacctaccaaaacagttctgcagcgttta
attcctcatgaaatgttgaaacataatcgtcgtgttcattggtgcaaaacgtttgaaatt
ttaaaggaatatattcatttaattgaatataaaggatgtcgtgatattctgcatctagtt
ctgttgaagttgaaaaatgtaccgacaacatcttggtctgaaatgacagaacaaatgaat
gctataattgatgtaattgaatacctattagatccagaagcttgtctattaccagggtat
ttagccgttaatgagattcgtcaatattctggggaggaccaaccacccggtcattggagt
ctatcagggaaagtcgcggagtttgtagacagatttcgtgcaacggcgaccatggtttcc
acaacaggacggtcacatcttttgccggttgtttttcatttttctgttccgttaacgacc
acttggaaacttgatcatgagactttgagattcacaacgaaaggacaacttccgtatgat
aaaagtttatatcaacgccaaacgaagctcttgagatacattcttgagcagccgtattca
agagatatggtgtgtcatgttctgaatcttcaaaaacagcaaaagcaaagatgcgaagcg
ttagaaacagaactggttgatttagttgtcagcacaatggaacgaactagtgaaatcgaa
aatttagatgaaaaggacgatgcttatcgtataatacatttacaatggcaacatttatca
agtcaggtgatctactttgttcttttgcaattcgcagttttcccaagaatggttgaaaat
ttttatcagaaactttcatcaagaaatgtcaaaaatggacgtgatcatttgatgtgggtc
ttgcttcaatttatttcaggaagcattcaaaaaaatccacttagcgattttcttccgatt
ataaagttgatgaatttgttgtattctgaacgtcaacctcttccagaacctgatataacg
aagccgttcagcacacacaagtttgctgcaatttgcattttaatgcatttgaacaggaaa
gcccagagtgataatcaacaacaagaaaatgcaagttctaacagctcttcggggtctatt
agcaccacgtccaaaactgcacaatttcaacattgtgcgataccagtatcattacaaaaa
caccacgagtatttgcagcgttgtttggaatcaaagaacaacagtttgcaagactatgcg
atcgctctgatatgtaacgcttgtagcacgacaacagaacttttcaacggacctattaac
tctctagttgacagtatttatggagattcgaccacgacacctttacccggagaaaactgc
gtagcttttgctaaaacaacaccactttcaatgagtctcctcgattctttaactgttcac
acaaaaatgagtttgattcatcatattgtggtcaaagttatgaatttggcgcagaataat
tcgaacgtggctttgtcacctgcagtggtagagacgtacagtcgattgttggtttacatg
gaaacggaatcgcttggggtcaaaggtcttattagtcaagtatttccgaaagttttacaa
aataactcactcggtattttgaatactttattggaaatgttcagctatcgtttgcatcat
attcaacctcaatatcgcatccaattattgacaaatttacaccgggtagcagcagagcct
aatactgatcataaccagttacaaatttgcgtagaaagtactgcattacgaatgatcaca
gcattgtccaacgcagatgttaaaccacaattatcacgattcacgagtgaaccgaaacaa
ataatttccaaagaatcggaggaacttaaccgtgcattagtgctcacacttgcaagatca
atacatatcacaggggccgagacaatttctggatcgtggtgtaacgatattctgaaagca
attttggaagaaactccacatagatgggcttcacatactttgaaatgttttccacgtagt
ttacaaatattttatcaacataaccaaatcgaatgtacgaataaagaaacgttaaaaaat
aatgtcgaagacgaatatcgaaaatggggccaagttattagtaaaagtgcccaacctggc
aattcgaatagcaacagcaatgcagcagtaagcgaaagtgacgctttagcgtatttcact
atggatggctcacctccgttctttctgtgtctgttatggaagattctaactttagacaga
aagccttcactggtttgtcacaatattctaactgtcattggacgtcgaaaattatcaaca
catgtgcgaactttttcagattttttggtgcacgagttctcactagatggtggtagtcat
gtaaaacgatacattccaattgtgcgagatatgattttgaaatataatctggtatttctg
gaccaactaattttatgcttggctttgcgttgcaatgaaggaaatgaagcgcaggttgct
ttctttattattcagtacttgttgatgaagccggatgatttccgtgcgagagttcattca
tttgtacaagacacaaaatctgcggaacattggacgctagatgactggcatgtcaaacat
atgaattatcatcgaaaatttcctgagaaattttatttcgaaggtttgaaatcttcggcc
actgagggcgaagaagaagaaaagagctcggattcttctcagcaatatttgccggtttat
tttggaaacttgactttgagatttcttccagttttcgatttagttgttcatcgatttttg
gaattaatgccggtaacgaattcgttagaaacattacttgctcatcttggtccgttgtat
aaattccatgaacaacccattacgtatttattcaatacgttgcattattatgaagctaga
ttacgcgatcgtcatagtttgaaaaaaactcttgtttcgacaattataggatcaatgaat
gatacaaaaccgcagaactgggcattatctgagcaatacttgaattacgctgctcaacaa
gacaattggaaacctgaaaacaattatttttgtatgttagtgagacgtcttgttgataca
attgatgggaaacatccagcaccgtttccagcttgcgattggcgctttaatgaatttcca
aacgccgctgctcatgctcttcacgtcacttgtgttgagttgatggctttaccaatgcaa
cctgaatctgttggtctggctttaatggaagttgttctcaaaatgcaatctgtgatagag
cgcaaatatgtaatgatgtggaccaatgctgttgctcttttactcacaactttaccggaa
atttactggaaaccgttacacacagaattagtgaatgtaatacaatcaccagcactgaat
tcttctgcagtcggcatgacagagtacccgtattacttgcttaaattttccgatcagcac
ttgtctttttctgaccattcttgcacgcgtttactcgctcttactcacgtagtgtggcat
catatgggaatcggacagctctcactcgttccgcagtttttaaaagaacaagtcaaacct
aacgtaatgacagaactgcaacttttgtatgtctttcatctgatcgggccgtttttgccg
aggtttcagcatgagcgaacacgatgtatgattgacgtagcagtggttttatacgacatg
ctcttgcaagtcagcgaaaattgtgatgacatacgtttcatggatgaaattgccgacttc
ttatatcatctcaagtacatgcatattggaatagcgattaataatcaagtagaaggtatt
attgatcgtttgaaaccaggcatgcggaaaagattaaggttcatcatccacaccgcaagt
gccaaagaacagttcagaagtccgagtgcaccgtcctctgctagtcacggtgatgggacc
taa
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