Styela clava (leathery sea squirt): 120327525
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Entry
120327525 CDS
T07291
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120327525
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120327525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
120327525
NCBI-ProteinID:
XP_039249772
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MTNGSVHAFLNFQEMTREIAPEDCVSGLLNFFHKQTVLRHINFVADMIEICLKDSILPTK
TVLQRLIPHEMLKHNRRVHWCKTFEILKEYIHLIDYKGCRDILHLVLLKLKNVPTTSWSE
MTEQMNAIIDVIEYLLDPEACLLPGYLAVNEIRQYSGEDQPPGHWSLSGKVTEFVDRFHA
TATMVSTTGRSHLLPVVFHFSVPLTTTWKLDHETLRFTTRGQLPYDRSLYQRQTKLLRYI
LEQPYSRDMVCHVLNLQKQQKQRCEALETELVDLVVSTMERTSEIENLDEKDDAYRIIHL
QWQHLSSQVIYFVLLQFAVFPRMVENFYQKLSSRNVKNGRDHLMWVLLQFISGSIQKNPL
SDFLPIIKLMNLLYSERQPLPEPDITKPFSTHKFAAICILMHLNRKAQSDNQQQENASSN
SSSGSISTTSKTAQFQHCAIPVSLQKHHEYLQRCLESKNNSLQDYAIALICNACSTTTEL
FNGPINSLIDSIYGDSTTTPLPGENCVAFAKTTPLSMSLLDSLTVHTKMSLIHHIVVKVM
NLAQNNSNVALSPAVVETYSRLLVYKETESLGVKGLISQVFPKVLQNNSLGILNTLLEMF
SYRLHHIQPQYRIQLLTNLHRVAAEPNTDHNQLQICVESTALRMITALSNADVKPQLSRF
TSEPKQIISKESEELNRALVLTLARSIHITGAETISGSWCNDYLKAILEETPHRWASHTL
KCFPRSLQIFYQHNQIECTNKETLKKNVEDEYRKWSQVISKSAQPGNSNSNSNAAVSESD
ALAYFTMDGSPPFFLCLLWKILTLDRKPSLVCHNILTVIGRRKLSTHVRTFSDFLVHEFS
LDGGSHVKRYIPIVRDMILKYNLIFLDQLILCLALRCNEGNEAQVAFFIIQYLLMKPDDF
RARVHSFVQDTKSAEHWTLDDWHVKHMNYHRKFPEKFYFEGLKSSATEGEEEEKSSDSSQ
QYLPVYFGNLTLRFLPVFDLVVHRFLELMPVTNSLETLLAHLGPLYKFHEQPITYLFNTL
HYYEARLRDRHSLKKTLVSTIIGSMNDTKPQNWALSEQYLNYAAQQDNWKPENNYFCMLV
RRLVDTIDGKHPAPFPACDWRFNEFPNAAAHALHVTCVELMALPMQPESVGLALMEVVLK
MQSVIERKYVMMWTNAVALLLTTLPEIYWKPLHTELVNVIQSPALNSSAVGMTEYPYYLL
KFSDQHLSFSDHSCTRLLALTHVVWHHMGIGQLSLVPQFLKEQVKPNVMTELQLLYVFHL
IGPFLPRFQHERTRCMIDVAVVLYDMLLQVSENCDDIRFMDEIADFLYHLKYMHIGVAIN
YQVEGIIDRLKPGMRKRLRFIIHTASAKQQFRSPSAPSSASHDDGT
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacggctccgtgcatgcctttctcaattttcaagaaatgacccgagagattgcg
cccgaagattgtgtgtctggtttgttgaattttttccataaacaaactgttttacgtcac
ataaattttgtagcggacatgatcgaaatttgtttgaaggattcgatactacctaccaaa
acagttctgcagcgtttaattcctcatgaaatgttgaaacataatcgtcgtgttcattgg
tgcaaaacgtttgaaattttaaaggaatatattcatttaattgattataaaggatgtcgt
gatattctgcatctagttctgttgaagttgaaaaatgtaccgacaacctcttggtctgaa
atgacagaacaaatgaatgctataattgatgtaattgaatacctattagatccagaagct
tgtctattaccagggtatttagccgttaatgagattcgtcaatattctggggaggaccaa
ccacccggtcattggagtctatcagggaaagtcacggagtttgtagacagatttcatgca
acggcgaccatggtttccacaacaggacggtcacatcttttgccggttgtttttcatttt
tctgttccgttaacgaccacttggaaacttgatcatgagactttgagattcacaacgaga
ggacaacttccgtatgatagaagtttatatcaacgccaaacgaagctcttgagatacatt
cttgagcagccgtattcaagagatatggtgtgtcatgttctgaatcttcaaaaacagcaa
aagcaaagatgcgaagcgttagaaacagaactggttgatttagttgtcagcacaatggaa
cgaactagtgaaatcgaaaatttagatgaaaaggacgatgcttatcgtataatacattta
caatggcaacatttatcaagtcaggtgatctactttgttcttttgcaattcgcagttttc
ccaagaatggttgaaaatttttatcagaaactttcatcaagaaatgtcaaaaatggacgt
gatcatttgatgtgggtcttgcttcaatttatttcaggaagcattcaaaaaaatccactc
agcgattttcttccgattataaagttgatgaatttgttgtattctgaacgtcaacctctt
ccagaacctgatataacgaagccgttcagcacacacaagtttgctgcaatttgcatttta
atgcatttgaacaggaaagcccagagtgataatcaacaacaagaaaatgcaagttctaac
agctcttcggggtctattagcactacgtccaaaactgcacaatttcaacattgtgcgata
ccagtatcattacaaaaacaccacgagtatttgcagcgttgtttggaatcaaagaacaac
agtttgcaagactatgcgatcgctctgatatgtaacgcttgtagcacgacaacagaactt
ttcaacggacctattaactctctaattgacagtatttatggagattcgactacgacacct
ttacccggagaaaactgcgtagcttttgctaaaacaacaccactttcaatgagtctcctc
gattctttaactgttcacacaaaaatgagtttgattcatcatattgtggtcaaagttatg
aatttggcgcagaataattcgaacgtggctttgtcacctgcagtggtagagacgtacagt
cgattgttggtttacaaggaaacggaatcgcttggggtcaaaggtcttattagtcaagta
tttccgaaagttttacaaaataactcactcggtattttgaatactttattggaaatgttc
agctatcgtttgcatcatattcaacctcaatatcgcatccaattattgacaaatttacac
cgggtagcagcagagcctaatactgatcataaccagttacaaatttgcgtagaaagtact
gcattacgaatgatcacagcattgtccaacgcagatgttaaaccacaattatcacgattc
acgagtgaaccgaaacaaataatttccaaagaatcggaggaacttaaccgtgcattagtg
ctcacacttgcaagatcaatacatatcacaggggccgagacaatttctggatcgtggtgt
aacgattatctgaaagcaattttggaagaaactccacatagatgggcttcacatactttg
aaatgttttccacgtagtttacaaatattttatcaacataaccaaatcgaatgtacgaat
aaagaaacgctaaaaaagaatgtcgaagacgaatatcgaaaatggagccaagttattagt
aaaagtgcccaacctggcaattcgaatagcaacagcaatgcagcagtaagcgaaagcgac
gctttagcgtatttcactatggatggctcacctccgttctttctgtgtctgttatggaag
attctaactttagacagaaagccttcactggtttgtcacaatattctaactgtcattgga
cgtcgaaaattatcaacacatgtgcgaactttttcagattttttggtgcacgagttctca
ctagatggtggtagtcatgtaaaacgatacattccaattgtgcgagatatgattttgaaa
tacaatctgatatttctggaccaactaattttatgcttggctttgcgttgcaatgaagga
aatgaagcgcaggttgctttttttattattcagtacttgttgatgaagccggatgatttc
cgtgcgagagttcattcatttgtgcaagatacaaaatctgcggaacattggacgctagat
gactggcatgtcaaacatatgaattatcatcgaaaatttcctgagaaattttatttcgaa
ggtttgaaatcttcggccactgagggcgaagaggaagaaaagagctcggattcttctcaa
caatatttgccggtttattttggaaacttgactttgagatttcttccagtttttgattta
gttgttcatcgatttttggaattaatgccggtaacgaattcgttagaaacattacttgct
catcttggtccgttgtataaattccatgaacaaccaattacgtatttattcaatacattg
cattattatgaagctagattacgcgatcgtcatagtttgaaaaaaactcttgtttcgacg
attataggatcaatgaatgatacaaaaccacagaactgggcattatctgagcaatacttg
aattacgctgctcaacaagacaattggaaacctgaaaacaattatttttgtatgttagtg
agacgtcttgttgatacaattgatgggaaacatccagcaccgtttccagcttgcgattgg
cgctttaatgaatttccaaacgccgctgctcatgctcttcacgtcacttgtgttgagttg
atggctttaccaatgcaacctgaatctgttggtctggctttaatggaagttgttctcaaa
atgcaatctgtgatagagcgcaaatatgtaatgatgtggaccaatgctgttgctctttta
ctcacaactttaccggaaatttactggaaaccgttacacacagaattagtgaatgtaata
caatcaccagcactgaattcttctgcagtcggcatgacagagtacccgtattacttgctt
aaattttccgatcagcacttgtctttttctgaccattcttgcacgcgtttactcgctctt
actcacgtagtgtggcatcatatgggaatcggacagctctcactcgttccgcagttttta
aaagaacaagtcaaacctaacgtaatgacagaacttcaacttttgtatgtctttcatctg
atcgggccgtttttgccgaggtttcagcatgagcgaacacgatgtatgattgacgtagca
gtggttttatacgacatgctcttgcaagtcagcgaaaattgtgatgacatacgtttcatg
gatgaaattgccgacttcttataccatctcaagtacatgcatattggagtagcgattaat
tatcaagtagaaggtattattgatcgattgaaaccaggaatgcggaaaagattaaggttc
atcatccacaccgcaagtgccaaacaacagttcagaagtccgagtgcaccgtcctctgct
agtcacgatgatgggacctaa
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