Styela clava (leathery sea squirt): 120327557
Help
Entry
120327557 CDS
T07291
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04140
Autophagy - animal
sclv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120327557
04148 Efferocytosis
120327557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120327557
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120327557
Hops complex
120327557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
120327557
NCBI-ProteinID:
XP_039249811
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MSETVDWSPLGDVTYQKKTIYPSMRWNQNIDLSKNLVAISQCGGLIATMKDENLTGQGTG
INRPILSVYNAAGEGIGSCRWNSGLVIGLAWTNLEDLLCIQDDGRVLIYSMFCEFIKVIE
MGVESCESKVLDYRTFMSGYGTGLVVLNGLYRFYLVNNIYDIKLKKLADTPGLRTAPSSW
CVLASERDPRILVSNENEIYLLKCGGECSLQFPTSMQSKVTSYIEMAASLNGKHVVLYTD
AGIMWMGSSDFQEKYCEFNTNNNSRPRQLLWCCDYSSSRTVNSDKNETISSAVVVYWPRL
VLLVGLKKDWVRFAVDEPQDGMPSNHLQLDLDGVHMLSSQRHEFLQRVQTESEGIFKIGS
MASGALLHAAAKEFKKESQKADEYMRMLLEKQELQSAIEQCILAAESEFDSESQKSLLRS
ASFGKAFYPDIRITEMFVDVTRTLRVLNNIREGRTGILLTSKQLDFLTAGTVIDRLIARR
QFAVAYHICKFLRIPENQGSSRVLAHWACYKVQKADMDDDTTARAIKNKLRSAKGVSYAS
IAEKAVKCKKMDLAVKLLEYEQRASEQVRLLIALGQHGLALEKAVISGNTDLTYEVIGHL
RERSSLSDFLMTVRQHPTAYRLYLKSCKDQNPDMLKHLHEQEDNFLELAHCYVRESYGTF
SPEDRIVSLQEAHQNFLKAKDEFGAKASEDQLKLIRQQTLLEEESEQSYVETSIHDTLNN
LLLSGNVKKADQLRKEFKVSDKRWWILRITTLAQLGHYQELESFSKSKKSPVGYLPFVEA
CANYGAYHEIGKYIGKVAQDQRVLALIKAGNIKQAGDLAMQTKNTNDLDLVLKRCGVENR
DTAERVVAMLNQLQR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaactgtggattggagccctttgggcgatgttacttatcaaaagaaaaccatc
tatccatctatgagatggaatcaaaatattgatttgtcaaagaatcttgtggctatttct
caatgtggaggtctgattgctacaatgaaagatgagaacttaacgggccaaggtactgga
ataaatcgcccaattttgagtgtgtacaatgctgcaggagagggaattggaagttgtcgt
tggaatagcggactggtgattgggctggcctggacaaacttggaagatttgttgtgtata
caagatgatggaagagtcctgatttactccatgttttgtgagttcataaaggtaattgaa
atgggagtggaatcttgtgaaagcaaagttctggattatcgtaccttcatgagtggatat
ggtactggtttggttgtcctcaatggattatatcgattttatcttgtgaacaacatttat
gatatcaaactgaaaaaactagcagatacacctggattgagaacagctccaagcagttgg
tgtgttttggcatcggaacgagacccaagaatacttgtttcaaatgagaatgaaatatat
ttgttgaaatgtggaggtgaatgttccttgcagtttcccacaagcatgcaatcgaaagtt
acatcatatatcgaaatggcagcttctctcaatggcaagcatgttgttttatacaccgat
gcaggcataatgtggatgggttcttctgattttcaagaaaaatattgtgagttcaacaca
aataataatagtcgaccaagacagcttctgtggtgctgtgattattcttcatcaagaact
gtcaattcagacaaaaatgaaactataagttctgcagttgtcgtgtactggccaagactt
gtacttcttgttggattgaaaaaggactgggtaagatttgctgttgatgaaccccaggat
ggtatgccttcaaatcaccttcaattggatcttgatggagttcacatgttgtcttcccaa
agacacgagtttttacagagagtgcaaactgaatctgagggaatatttaaaattggatct
atggcttctggtgcattgcttcatgctgcagcgaaagaattcaaaaaggagagtcaaaaa
gcagatgaatacatgaggatgctgcttgaaaaacaggaactgcaatctgctattgaacaa
tgcatattagctgccgaatcagagtttgattcagaatctcagaaatcacttttgcgatca
gcatcttttggcaaagcattttatccagatataagaattacggagatgtttgttgatgtt
actcgtactttaagagtactcaataacatcagagagggaagaacagggatacttctcact
tcaaaacaacttgattttcttactgctggaacagttattgatcgtctcattgcaagacga
caatttgcagtggcatatcacatctgcaagtttcttcgtatcccagaaaaccagggatca
agtcgtgtactggcacattgggcctgttataaagtgcaaaaagctgacatggatgatgat
accacagcaagagctattaaaaataaattaagatctgcaaaaggtgtttcttatgccagt
attgctgaaaaagctgtcaaatgcaaaaaaatggatttggccgtaaagcttttggaatat
gagcaacgagcttctgagcaggtaaggcttttaattgctcttggacaacatggactagct
ttagaaaaagcagtgatcagtggaaacacagacttaacatatgaagtgattggccatttg
agagagcgtagcagtctttctgattttctgatgactgttcgtcaacaccccactgcttat
cgactatatctgaaatcatgcaaagaccaaaacccagatatgttgaagcatcttcatgag
caagaagacaactttttagaacttgctcattgttatgtaagagaaagctatggaacattc
agtccagaagacagaatagtatcactgcaagaagcacatcaaaactttttgaaagcaaaa
gatgagttcggagcgaaagcatcagaagatcaattgaaacttataagacaacagacattg
ctggaagaagaaagtgagcaatcgtatgttgagacttcaattcacgacacattgaacaat
ctcctgttgtctgggaatgtcaagaaagcagatcaattgcgcaaagaattcaaagtttct
gataaacgatggtggattctacgcattactactttggcacagctaggccattatcaagaa
ttggaaagcttttcaaagagtaaaaaatcaccagttggatatttgccgtttgttgaagca
tgtgctaactatggtgcatatcatgagattggaaaatacataggaaaagtggctcaggat
caacgtgtactcgcactcatcaaagctggcaatataaagcaagctggtgatcttgcgatg
caaaccaaaaatacaaatgaccttgatttagtcttgaaaagatgtggagtagaaaataga
gacactgcagaacgagtggttgcaatgttaaatcaactacaaagatag
DBGET
integrated database retrieval system
