Styela clava (leathery sea squirt): 120327583
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Entry
120327583 CDS
T07291
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120327583
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sclv01007
]
120327583
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sclv03016
]
120327583
Enzymes [BR:
sclv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
120327583
Amino acid related enzymes [BR:
sclv01007
]
Aminoacyl-tRNA synthetase
Class II (U)
120327583
Transfer RNA biogenesis [BR:
sclv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120327583
Prokaryotic type
120327583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
120327583
NCBI-ProteinID:
XP_039249843
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MPTISVNRDLLHKWLGKEYSEEEFDELCFEYGLELDEVTSVKEQIQKEQGEAKAEGASDD
VIYKIDVPANRYDLLCMEGLARGLKVFLKQIEPPRYVCSSPPDLIKLNQSLATLEVRAEV
VAAVLRNISFTQERYESFIDLQDKLHQNIGRKRSLVSIGTHDLDTIQGPFLYDARKPTDI
KFKALGQTKEYTAVELMELYSKESHLKSYLPIIRDKPVYPIIYDSKGVVLSMPPIINGEH
SKITLNTKNIFIEITATDLTKAKITLDTIVAMYSEYCDKPFIIEPVEITRPDGKKLITPE
LKYRKETVSAEYINNKIGIKQSAEQHADSLTRMCLKSKVLPENGKIEVEIPPTRSDIMHA
CDIMEDCAVAYGFNNIAFTFPKSVTIGAQFKLNKLTDLLRIDMAAAGFTEGLSFALCSKD
DVGRKLRDGVKDIHPVHISNPKTLEFQVTRTSLLPGLLKTAASNRNMPLPMKLFEIQDII
FKDSTADTGSRNRRHLAAIYYNKTPGFEVIHGLLDRIMQLLDIKPSDEIGPDKYKILAAE
NSAFFPGRCADVMINGKSVGKMGVLHPEVITNFELVYPASALDLDLQYFLT
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccgactataagtgtgaatcgggatttgttgcataaatggcttggaaaagaatattcg
gaagaagaatttgatgaactatgtttcgaatatggtctcgaacttgatgaagttacgtcc
gtgaaggagcagatacaaaaagagcaaggggaagcaaaggcagaaggtgcctcagatgac
gttatatataaaattgatgtccccgctaacaggtacgacctgttgtgcatggaaggcctt
gctagaggtcttaaagtgtttttaaaacagattgaaccacctcgttatgtgtgctcctct
cctcctgatttgataaaattgaaccaatcacttgccacactagaagttcgagcagaagta
gtagcagctgttttacgaaacatttcttttacacaagaacgatatgaaagtttcattgac
ttgcaggacaaacttcaccaaaatattggcagaaagcgtagccttgtttccatcggcact
catgacttggacacaatacaaggtccgtttttatatgatgctagaaagccaacagatata
aaattcaaagctctcggccaaacaaaagagtacactgctgttgagttgatggaattgtac
tctaaggagagtcatttgaaatcatatttgccgattattcgtgacaaacctgtttatcca
ataatttacgatagtaagggagtggtactttcgatgcccccaatcataaatggtgaacat
tcaaaaatcactttgaacaccaaaaatatatttattgaaatcacagcgacggatttgaca
aaggcaaaaataactctggatacgattgtagcgatgtactcggaatattgcgataaacca
ttcataattgaacccgttgaaataacaagaccggatggaaagaaactcatcacaccggaa
ttgaaatatcgaaaagaaactgtttctgctgaatatatcaataataaaatcggcatcaaa
caaagtgcagaacagcatgctgattcactaacaagaatgtgtttgaaatctaaggtttta
ccagaaaatggcaaaattgaagttgaaattcccccgacaagatccgacatcatgcacgct
tgtgatattatggaagattgtgctgtagcatatggattcaacaacattgccttcaccttt
cctaaatctgttactattggagctcaatttaaactaaacaagctgacagatttattgaga
atcgatatggctgcagctggattcacagagggattgtcttttgctttgtgctcgaaagac
gatgtaggaagaaaattacgggatggcgttaaagatatccatcctgttcacatcagcaac
ccaaaaacattggaatttcaagtcacgcggacctctcttctacctggattactaaaaact
gctgcttctaacagaaacatgccactcccgatgaaactcttcgagatacaagatattatt
tttaaggatagcactgcagatacaggatcaaggaacagaagacacctggctgctatttac
tacaacaaaacccctggatttgaagtaatccatggcctacttgatcgaatcatgcaatta
ttggatataaaaccatcagatgaaataggaccagataaatacaagatcctggctgctgag
aactctgccttcttcccaggacggtgtgctgatgttatgataaatggaaaatctgtagga
aagatgggagttctacacccagaagttatcaccaattttgaacttgtttatccagcatca
gcattagatcttgatttgcaatattttttgacataa
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