Styela clava (leathery sea squirt): 120327651
Help
Entry
120327651 CDS
T07291
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120327651
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sclv01002
]
120327651
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120327651
03036 Chromosome and associated proteins [BR:
sclv03036
]
120327651
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120327651
Peptidases and inhibitors [BR:
sclv01002
]
Metallo peptidases
Family M67
120327651
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120327651
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
120327651
BRISC complex
120327651
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
120327651
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120327651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
HR1
Motif
Other DBs
NCBI-GeneID:
120327651
NCBI-ProteinID:
XP_039249916
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MGSVRMVILNADAYYSCLTHAFSNEQEEIMGLCIGETKDTILGCEVHITSTLSLRRLDKR
KDRVEISVEQLSNASSKAEELARKTGRPLRIIGWYHSHPHITVWPSHVDIATQADYQTMD
GTFVGLIFSCFNEGKSNEHSIHLTCFQSVTTSGWDSAPHERVEIPISIAPCRTISDACMD
ALKELPKILMHEETDTYEAANSSDGDFMTRLYNGSVHVQALCKLNSNLLLPMLKVTERST
ARAQLKLEETEKDIEELKKRITELKLELGET
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagtaagaatggtaattttaaatgctgatgcatattattcctgtctcacacat
gctttttctaatgagcaagaagaaattatgggtttgtgtatcggagaaaccaaagatacg
atacttggatgtgaagtgcatataacatcaactttatcattacgaagattggataaaaga
aaagacagagttgaaatatcagttgaacaactttccaatgcatcttcgaaagcagaagaa
ctagccagaaaaactggacgacctttacgaattattggttggtatcattcacatccacac
attactgtttggccttcacatgttgatattgcgacacaagcagattatcaaacaatggat
ggtacttttgttggattgatattttcatgttttaatgaaggaaaatcgaatgaacattct
atacatctgacatgttttcaatctgtaacaacatcaggctgggattctgcaccacatgaa
agagttgagatcccaatatcaattgcaccatgtagaactatcagtgatgcttgtatggat
gcattgaaagaattaccgaaaatattgatgcatgaagaaacagatacatatgaggctgca
aactcttcagatggagattttatgacaagattatataatggaagtgttcatgtccaagca
ctctgtaaattgaacagcaatctgttgttgccaatgttgaaagtcacagagagatctaca
gcacgagctcaactcaagttggaagaaactgaaaaggatatcgaggaactaaaaaagcga
attacagaattgaagcttgaacttggagaaacttga
DBGET
integrated database retrieval system
