Styela clava (leathery sea squirt): 120327666
Help
Entry
120327666 CDS
T07291
Name
(RefSeq) homeobox protein HOX3-like
KO
K09452
homeobox protein aristaless-related
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120327666
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120327666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120327666
NCBI-ProteinID:
XP_039249936
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MMASPSTMKSTYSIEHLLARHHHPHCHSSSSSSGLGNSRSFSTEEMQIADIKISSAKLSP
SKMDSDTGSERTSSREESELSAGVQNKNGGPANAARIEFLASDNIIQDSVTTDLQFHQYY
KNLLRNASGNQKLASLFYPILDPSFGDENDTSNARLPSEIKSSNEKASADSDCLSDSTDP
RSPQGVLSSTEGGLLKTIRVKSESFPDDERSNAKSPISSDRGSESDLQPGDMKSNTDETW
KTNDITPSKNVHENTTMPTTSTHLTSPKSGSSAEKRKQRRYRTTFSAYQLEELERAFQKT
HYPDVFTREELAMRVDLTEARVQVWFQNRRAKWRKREKQGGLFGTPFGGNGILGPYHPLH
LYTANRVLLDPTSIHHPFIHTSEHERFRSYHNFLQSDVPVAKAPIPTFPVPSWNPIAFAA
ATLALQKPRSRALHDLISLSREKYPAGRVPNISTTHPDISRMQQFQTHATNNLLSPSRLS
QAAAMSYINPMVLPQMFGMLSNKNANSGSHTEGIGCNKPSPDLPDFKSTHRRSLETTGSS
PELMSRENVYEFVAGSSLLEKARK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctccaagtacgatgaaatcaacgtattcgatcgaacatctgttagctcgt
catcatcaccctcattgtcattcatcttcttcatcatcaggactcggaaactccagaagt
ttctccactgaagaaatgcaaattgctgacataaaaatctcatctgcgaaactgtcacca
agtaaaatggacagcgatacgggctcagagcgaacttcaagtcgcgaagaatcggagtta
agcgctggggtacaaaacaaaaatggcggaccagcgaacgcagcgcgaatagaattcctc
gccagtgacaacatcattcaagattcagttaccacagatcttcaatttcatcaatattac
aagaacttattgagaaacgcaagtggaaatcaaaaactggcatcgttgttctatcccatt
ctagatccaagtttcggagatgaaaacgacacatcgaatgcacgacttccctcagagata
aaatcaagtaatgaaaaggcttcagcagacagtgattgcctttcagattcaacagaccca
agatctccacaaggtgtattatcaagcactgaaggtggactgctaaaaacaatccgtgtc
aaaagcgagagttttccagatgacgaacgcagtaatgctaaaagtccaatttcctcagat
cgtggctcggaatccgacctccagccaggagacatgaaatcaaatacagatgaaacttgg
aaaacaaacgacatcacaccaagtaaaaatgtccatgaaaatacaacaatgccgacaaca
tcgacgcatttgacgtcgccaaaaagcggaagttcagccgaaaagcgtaagcaacgccga
tacagaacaactttctcagcgtatcaactggaagaattagaacgtgcctttcaaaaaact
cattacccggacgtgtttaccagagaagaattagctatgagagttgacttgacggaagca
agagtacaggtttggtttcaaaaccggagagcgaagtggagaaagagggaaaagcaaggc
ggtttgttcggaacaccatttggcgggaacgggatcctgggaccttaccatccattgcat
ctttacacggctaatagagttttattagatcctacttctattcatcacccatttatacat
acgtcggaacacgaaagatttcgttcatatcataattttcttcaatctgatgtccccgtg
gcaaaagcaccgataccgacgtttcccgtgccgtcttggaatccgatagcttttgctgcc
gctacactggcattacaaaaaccgagaagtcgggcgttacatgaccttatttccctatct
agagaaaaatatcctgcaggaagagtgccaaacatctcgacaacgcatccggatatttca
cgaatgcaacaatttcaaacccacgcaacgaacaatctactgtcaccctcgagactctct
caagcggcagctatgtcgtacataaatccaatggttcttcctcaaatgtttggcatgcta
tcaaataaaaacgccaactcaggaagccatacagagggaattgggtgcaataaaccatcg
cctgatttacctgacttcaaatcaacacaccgacggtctttggaaaccacgggtagctcc
ccagaacttatgtcacgtgaaaacgtgtacgaatttgttgccggatcgtctttactcgaa
aaagcaagaaaatga
DBGET
integrated database retrieval system